Genome-wide association studies in plant pathosystems: success or failure?

C Demirjian, F Vailleau, R Berthomé, F Roux - Trends in plant science, 2023‏ - cell.com
Harnessing natural genetic variation is an established alternative to artificial genetic
variation for investigating the molecular dialog between partners in plant pathosystems …

Pyramiding for resistance durability: theory and practice

CC Mundt - Phytopathology, 2018‏ - Am Phytopath Society
Durable disease resistance is a key component of global food security, and combining
resistance genes into “pyramids” is an important way to increase durability of resistance. The …

Copy number variation introduced by a massive mobile element facilitates global thermal adaptation in a fungal wheat pathogen

SM Tralamazza, E Gluck-Thaler, A Feurtey… - Nature …, 2024‏ - nature.com
Copy number variation (CNV) can drive rapid evolution in changing environments. In
microbial pathogens, such adaptation is a key factor underpinning epidemics and …

Quantitative pathogenicity and host adaptation in a fungal plant pathogen revealed by whole-genome sequencing

R Amezrou, A Ducasse, J Compain, N Lapalu… - Nature …, 2024‏ - nature.com
Abstract Knowledge of genetic determinism and evolutionary dynamics mediating host-
pathogen interactions is essential to manage fungal plant diseases. Studies on the genetic …

The pan-genome of Aspergillus fumigatus provides a high-resolution view of its population structure revealing high levels of lineage-specific diversity driven by …

LA Lofgren, BS Ross, RA Cramer, JE Stajich - PLoS Biology, 2022‏ - journals.plos.org
Aspergillus fumigatus is a deadly agent of human fungal disease where virulence
heterogeneity is thought to be at least partially structured by genetic variation between …

The dynamic fungal genome: polyploidy, aneuploidy and copy number variation in response to stress

P Vande Zande, X Zhou… - Annual review of …, 2023‏ - annualreviews.org
Fungal species have dynamic genomes and often exhibit genomic plasticity in response to
stress. This genome plasticity often comes with phenotypic consequences that affect fitness …

A small secreted protein in Zymoseptoria tritici is responsible for avirulence on wheat cultivars carrying the Stb6 resistance gene

Z Zhong, TC Marcel, FE Hartmann, X Ma… - New …, 2017‏ - Wiley Online Library
Zymoseptoria tritici is the causal agent of Septoria tritici blotch, a major pathogen of wheat
globally and the most damaging pathogen of wheat in Europe. A gene‐for‐gene (GFG) …

The genome biology of effector gene evolution in filamentous plant pathogens

A Sánchez-Vallet, S Fouché, I Fudal… - Annual review of …, 2018‏ - annualreviews.org
Filamentous pathogens, including fungi and oomycetes, pose major threats to global food
security. Crop pathogens cause damage by secreting effectors that manipulate the host to …

A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici

T Badet, U Oggenfuss, L Abraham, BA McDonald… - BMC biology, 2020‏ - Springer
Background The gene content of a species largely governs its ecological interactions and
adaptive potential. A species is therefore defined by both core genes shared between all …

Wheat blast: past, present, and future

PC Ceresini, VL Castroagudín… - Annual Review of …, 2018‏ - annualreviews.org
The devastating wheat blast disease first emerged in Brazil in 1985. The disease was
restricted to South America until 2016, when a series of grain imports from Brazil led to a …