Microbial co-infections in COVID-19: Associated microbiota and underlying mechanisms of pathogenesis

MN Hoque, S Akter, ID Mishu, MR Islam… - Microbial …, 2021 - Elsevier
The novel coronavirus infectious disease-2019 (COVID-19), caused by severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) has traumatized the whole world with the …

Bacterial co-infection in patients with COVID-19 hospitalized (ICU and Not ICU): review and meta-analysis

AP Santos, LC Gonçalves, ACC Oliveira, PHP Queiroz… - Antibiotics, 2022 - mdpi.com
The prevalence of patients hospitalized in ICUs with COVID-19 and co-infected by
pathogenic bacteria is relevant in this study, considering the integrality of treatment. This …

Dysbiosis of oral and gut microbiomes in SARS-CoV-2 infected patients in Bangladesh: elucidating the role of opportunistic gut microbes

SM Rafiqul Islam, MJ Foysal, MN Hoque… - Frontiers in …, 2022 - frontiersin.org
Coronavirus disease-2019 (COVID-19) is an infectious disease caused by SARS-CoV-2
virus. The microbes inhabiting the oral cavity and gut might play crucial roles in maintaining …

SARS-CoV-2 infection reduces human nasopharyngeal commensal microbiome with inclusion of pathobionts

MN Hoque, MMH Sarkar, MS Rahman, S Akter… - Scientific reports, 2021 - nature.com
The microbiota of the nasopharyngeal tract (NT) play a role in host immunity against
respiratory infectious diseases. However, scant information is available on interactions of …

Role of the Microbiome in the Pathogenesis of COVID-19

R De, S Dutta - Frontiers in cellular and infection microbiology, 2022 - frontiersin.org
The ongoing pandemic coronavirus disease COVID-19 is caused by the highly contagious
single-stranded RNA virus, SARS-coronavirus 2 (SARS-CoV-2), which has a high rate of …

[HTML][HTML] Genomic characteristics, virulence, and antimicrobial resistance in avian pathogenic Escherichia coli MTR_BAU02 strain isolated from layer farm in …

S Ievy, MN Hoque, MS Islam, MA Sobur… - Journal of Global …, 2022 - Elsevier
Background Colibacillosis, caused by avian pathogenic Escherichia coli (APEC), is one of
the most significant infectious diseases affecting poultry worldwide. Objectives This study …

Explainable artificial intelligence model for identifying COVID-19 gene biomarkers

FH Yagin, İB Cicek, A Alkhateeb, B Yagin… - Computers in Biology …, 2023 - Elsevier
Aim COVID-19 has revealed the need for fast and reliable methods to assist clinicians in
diagnosing the disease. This article presents a model that applies explainable artificial …

Induction of interferon response by high viral loads at early stage infection may protect against severe outcomes in COVID-19 patients

EC Rouchka, JH Chariker, B Alejandro, RS Adcock… - Scientific reports, 2021 - nature.com
Key elements for viral pathogenesis include viral strains, viral load, co-infection, and host
responses. Several studies analyzing these factors in the function of disease severity of …

The impact of infection with COVID-19 on the respiratory microbiome: A narrative review

T Zhu, J **, M Chen, Y Chen - Virulence, 2022 - Taylor & Francis
ABSTRACT Coronavirus disease 2019 (COVID-19), caused by SARS-CoV-2, has affected
millions of individuals with various implications. Consistent with the crucial role of the …