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Clinical use of current polygenic risk scores may exacerbate health disparities
Polygenic risk scores (PRS) are poised to improve biomedical outcomes via precision
medicine. However, the major ethical and scientific challenge surrounding clinical …
medicine. However, the major ethical and scientific challenge surrounding clinical …
Host genetics and infectious disease: new tools, insights and translational opportunities
Understanding how human genetics influence infectious disease susceptibility offers the
opportunity for new insights into pathogenesis, potential drug targets, risk stratification …
opportunity for new insights into pathogenesis, potential drug targets, risk stratification …
Efficient phasing and imputation of low-coverage sequencing data using large reference panels
Low-coverage whole-genome sequencing followed by imputation has been proposed as a
cost-effective genoty** approach for disease and population genetics studies. However …
cost-effective genoty** approach for disease and population genetics studies. However …
Creation and judicious application of a wheat resistance gene atlas
Disease-resistance (R) gene cloning in wheat (Triticum aestivum) has been accelerated by
the recent surge of genomic resources, facilitated by advances in sequencing technologies …
the recent surge of genomic resources, facilitated by advances in sequencing technologies …
Evaluating genotype imputation pipeline for ultra-low coverage ancient genomes
Although ancient DNA data have become increasingly more important in studies about past
populations, it is often not feasible or practical to obtain high coverage genomes from poorly …
populations, it is often not feasible or practical to obtain high coverage genomes from poorly …
Low-pass sequencing increases the power of GWAS and decreases measurement error of polygenic risk scores compared to genoty** arrays
Low-pass sequencing (sequencing a genome to an average depth less than 1× coverage)
combined with genotype imputation has been proposed as an alternative to genoty** …
combined with genotype imputation has been proposed as an alternative to genoty** …
Low coverage whole genome sequencing enables accurate assessment of common variants and calculation of genome-wide polygenic scores
Background Inherited susceptibility to common, complex diseases may be caused by rare,
pathogenic variants (“monogenic”) or by the cumulative effect of numerous common variants …
pathogenic variants (“monogenic”) or by the cumulative effect of numerous common variants …
Twelve years into genomic selection in forest trees: climbing the slope of enlightenment of marker assisted tree breeding
D Grattapaglia - Forests, 2022 - mdpi.com
Twelve years have passed since the early outlooks of applying genomic selection (GS) to
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …
Accelerated deciphering of the genetic architecture of agricultural economic traits in pigs using a low-coverage whole-genome sequencing strategy
R Yang, X Guo, D Zhu, C Tan, C Bian, J Ren… - …, 2021 - academic.oup.com
Background Uncovering the genetic architecture of economic traits in pigs is important for
agricultural breeding. However, high-density haplotype reference panels are unavailable in …
agricultural breeding. However, high-density haplotype reference panels are unavailable in …
The transferability of lipid loci across African, Asian and European cohorts
K Kuchenbaecker, N Telkar, T Reiker… - Nature …, 2019 - nature.com
Most genome-wide association studies are based on samples of European descent. We
assess whether the genetic determinants of blood lipids, a major cardiovascular risk factor …
assess whether the genetic determinants of blood lipids, a major cardiovascular risk factor …