SDT: a virus classification tool based on pairwise sequence alignment and identity calculation

BM Muhire, A Varsani, DP Martin - PloS one, 2014 - journals.plos.org
The perpetually increasing rate at which viral full-genome sequences are being determined
is creating a pressing demand for computational tools that will aid the objective classification …

[PDF][PDF] Maize streak virus: A review of pathogen occurrence, biology and management options for small holder farmers

C Karavina - 2014 - pdfs.semanticscholar.org
Cicadulina mbila being the main vector. In addition to cereals, the virus also infects wild
grasses. There are 11 known MSV strains, designated with the letters A to K, according to …

Metagenomics reveals the structure of Mastrevirus–host interaction network within an agro-ecosystem

S Claverie, M Hoareau, SB Chéhida, D Filloux… - Virus …, 2023 - academic.oup.com
As highly pervasive parasites that sometimes cause disease, viruses are likely major
components of all natural ecosystems. An important step towards both understanding the …

Identification of novel Bromus- and Trifolium-associated circular DNA viruses

S Kraberger, K Farkas, P Bernardo, C Booker… - Archives of …, 2015 - Springer
The genomes of a large number of highly diverse novel circular DNA viruses from a wide
range of sources have been characterised in recent years, including circular single-stranded …

Identification and characterization of a maize-associated mastrevirus in China by deep sequencing small RNA populations

S Chen, Q Huang, L Wu, Y Qian - Virology journal, 2015 - Springer
Abstract Background Maize streak Reunion virus (MSRV) is a member of the Mastrevirus
genus in the family Geminiviridae. Of the diverse and increasing number of mastrevirus …

Identification and molecular characterization of a novel sugarcane streak mastrevirus and an isolate of the A-strain of maize streak virus from sugarcane in Nigeria

A Yahaya, DB Dangora, MD Alegbejo, PL Kumar… - Archives of …, 2017 - Springer
Sugarcane and maize plants showing symptoms typical of those described for the so-called
“African streak viruses”(AfSVs) were encountered during field surveys conducted from …

Shoot propagation, regeneration, and callus induction and differentiation, of Axonopus compressus (Swartz) Beauv

Y **ong, Z Wei, J Liu, J Li, S Jian, X Zhang, Y Li… - In Vitro Cellular & …, 2024 - Springer
Abstract Axonopus compressus (Swartz) Beauv., a perennial herb in the Poaceae that has
been introduced to a number of tropical and subtropical countries and regions, can serve as …

Molecular diversity, geographic distribution and host range of monocot-infecting mastreviruses in Africa and surrounding islands

S Kraberger, S Saumtally, D Pande, MHR Khoodoo… - Virus research, 2017 - Elsevier
Maize streak virus (MSV), an important pathogen of maize in Africa, is the most extensively
studied member of the Mastrevirus genus in the family Geminiviridae. Comparatively little is …

Novel mastreviruses identified in Australian wild rice

S Kraberger, ADW Geering, M Walters, DP Martin… - Virus research, 2017 - Elsevier
Most known mastreviruses (family Geminiviridae) infect members of the grass family,
Poaceae. Although the greatest number of grass-infecting mastrevirus species have been …

Prevalence and genome characterization of field isolates of sugarcane mosaic virus (SCMV) in Nigeria

A Yahaya, DB Dangora, PL Kumar… - Plant …, 2019 - Am Phytopath Society
Maize and sugarcane are two economically important crops often grown in adjacent fields or
co-cultivated in the northern guinea savannah agroecological zone, a major cereal …