[HTML][HTML] Minireview: Engineering evolution to reconfigure phenotypic traits in microbes for biotechnological applications

K Kim, M Kang, SH Cho, E Yoo, UG Kim, S Cho… - Computational and …, 2023 - Elsevier
Adaptive laboratory evolution (ALE) has long been used as the tool of choice for microbial
engineering applications, ranging from the production of commodity chemicals to the …

Omics-driven hybrid dynamic modeling of bioprocesses with uncertainty estimation

S Espinel-Ríos, JM López, JL Avalos - Biochemical Engineering Journal, 2025 - Elsevier
This work presents an omics-driven modeling pipeline that integrates machine-learning
tools to facilitate the dynamic modeling of multiscale biological systems. Random forests and …

Development of an integrating systems metabolic engineering and bioprocess modeling approach for rational strain improvement

AET Rangel, AG Oviedo, FC Mojica, JM Gómez… - Biochemical …, 2022 - Elsevier
Due to metabolic engineering advances, it is possible to produce a large number of bio-
based chemical compounds. However, the downstream processing is challenging the …

Non-Dominated Sorting Differential Search Algorithm for Optimizing Regulatory-Metabolic Networks by Using Probabilistic Approach

R Ananda, KM Daud, S Zainudin - … International Conference on …, 2023 - ieeexplore.ieee.org
Modeling in biology has given valuable insights and can be a guide for wet labs. The
optimal prediction of a particular metabolite can be obtained by analyzing the genome-scale …

Towards the construction of an autotrophic Escherichia coli strain

M Schulz - 2023 - theses.hal.science
Autotrophic microorganisms convert CO2 into biomass using energy from light or from the
oxidation of inorganic molecules. When implementing biosynthetic pathways for the …

[PDF][PDF] Succinic Acid Production

G Melitos, N Misailidis, R da Gama Ferreira, D Petrides - 2023 - researchgate.net
Succinic acid is a versatile platform chemical. It can be used as a building block for the
synthesis of a wide range of products, including biodegradable plastics such as …