Smart breeding driven by big data, artificial intelligence, and integrated genomic-enviromic prediction

Y Xu, X Zhang, H Li, H Zheng, J Zhang, MS Olsen… - Molecular Plant, 2022 - cell.com
The first paradigm of plant breeding involves direct selection-based phenotypic observation,
followed by predictive breeding using statistical models for quantitative traits constructed …

Characterising the agriculture 4.0 landscape—emerging trends, challenges and opportunities

SO Araújo, RS Peres, J Barata, F Lidon, JC Ramalho - Agronomy, 2021 - mdpi.com
Investment in technological research is imperative to stimulate the development of
sustainable solutions for the agricultural sector. Advances in Internet of Things, sensors and …

Advances in “omics” approaches for improving toxic metals/metalloids tolerance in plants

A Raza, J Tabassum, Z Zahid, S Charagh… - Frontiers in Plant …, 2022 - frontiersin.org
Food safety has emerged as a high-urgency matter for sustainable agricultural production.
Toxic metal contamination of soil and water significantly affects agricultural productivity …

Advances in optical phenoty** of cereal crops

D Sun, K Robbins, N Morales, Q Shu, H Cen - Trends in plant science, 2022 - cell.com
Optical sensors and sensing-based phenoty** techniques have become mainstream
approaches in high-throughput phenoty** for improving trait selection and genetic gains …

Vision, challenges and opportunities for a Plant Cell Atlas

SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer… - Elife, 2021 - elifesciences.org
With growing populations and pressing environmental problems, future economies will be
increasingly plant-based. Now is the time to reimagine plant science as a critical component …

Crop breeding for a changing climate: Integrating phenomics and genomics with bioinformatics

JI Marsh, H Hu, M Gill, J Batley, D Edwards - Theoretical and Applied …, 2021 - Springer
Key message Safeguarding crop yields in a changing climate requires bioinformatics
advances in harnessing data from vast phenomics and genomics datasets to translate …

A primer on artificial intelligence in plant digital phenomics: embarking on the data to insights journey

AL Harfouche, F Nakhle, AH Harfouche… - Trends in Plant …, 2023 - cell.com
Artificial intelligence (AI) has emerged as a fundamental component of global agricultural
research that is poised to impact on many aspects of plant science. In digital phenomics, AI …

[HTML][HTML] The role of metadata in reproducible computational research

J Leipzig, D Nüst, CT Hoyt, K Ram, J Greenberg - Patterns, 2021 - cell.com
Reproducible computational research (RCR) is the keystone of the scientific method for in
silico analyses, packaging the transformation of raw data to published results. In addition to …

BioSamples database: FAIRer samples metadata to accelerate research data management

M Courtot, D Gupta, I Liyanage, F Xu… - Nucleic acids …, 2022 - academic.oup.com
The BioSamples database at EMBL-EBI is the central institutional repository for sample
metadata storage and connection to EMBL-EBI archives and other resources. The technical …