Dimensions of biodiversity in the Earth mycobiome

KG Peay, PG Kennedy, JM Talbot - Nature Reviews Microbiology, 2016 - nature.com
Fungi represent a large proportion of the genetic diversity on Earth and fungal activity
influences the structure of plant and animal communities, as well as rates of ecosystem …

Evolution and genome architecture in fungal plant pathogens

M Möller, EH Stukenbrock - Nature Reviews Microbiology, 2017 - nature.com
The fungal kingdom comprises some of the most devastating plant pathogens. Sequencing
the genomes of fungal pathogens has shown a remarkable variability in genome size and …

[HTML][HTML] What are the 100 most cited fungal genera?

CS Bhunjun, YJ Chen, C Phukhamsakda… - Studies in …, 2024 - ingentaconnect.com
The global diversity of fungi has been estimated between 2 to 11 million species, of which
only about 155 000 have been named. Most fungi are invisible to the unaided eye, but they …

The carbohydrate-active enzymes database (CAZy) in 2013

V Lombard, H Golaconda Ramulu, E Drula… - Nucleic acids …, 2014 - academic.oup.com
Abstract The Carbohydrate-Active Enzymes database (CAZy; http://www. cazy. org) provides
online and continuously updated access to a sequence-based family classification linking …

Fungal effectors and plant susceptibility

L Lo Presti, D Lanver, G Schweizer… - Annual review of …, 2015 - annualreviews.org
Plants can be colonized by fungi that have adopted highly diverse lifestyles, ranging from
symbiotic to necrotrophic. Colonization is governed in all systems by hundreds of secreted …

MycoCosm portal: gearing up for 1000 fungal genomes

IV Grigoriev, R Nikitin, S Haridas, A Kuo… - Nucleic acids …, 2014 - academic.oup.com
MycoCosm is a fungal genomics portal (http://jgi. doe. gov/fungi), developed by the US
Department of Energy Joint Genome Institute to support integration, analysis and …

Biologically active secondary metabolites from the fungi

GF Bills, JB Gloer - Microbiology spectrum, 2016 - journals.asm.org
Many Fungi have a well-developed secondary metabolism. The diversity of fungal species
and the diversification of biosynthetic gene clusters underscores a nearly limitless potential …

101 Dothideomycetes genomes: a test case for predicting lifestyles and emergence of pathogens

S Haridas, R Albert, M Binder, J Bloem… - Studies in …, 2020 - ingentaconnect.com
Dothideomycetes is the largest class of kingdom Fungi and comprises an incredible diversity
of lifestyles, many of which have evolved multiple times. Plant pathogens represent a major …

The two-speed genomes of filamentous pathogens: waltz with plants

S Dong, S Raffaele, S Kamoun - Current opinion in genetics & …, 2015 - Elsevier
Fungi and oomycetes include deep and diverse lineages of eukaryotic plant pathogens. The
last 10 years have seen the sequencing of the genomes of a multitude of species of these so …

EffectorP: predicting fungal effector proteins from secretomes using machine learning

J Sperschneider, DM Gardiner, PN Dodds… - New …, 2016 - Wiley Online Library
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …