Worldwide Protein Data Bank (wwPDB): A virtual treasure for research in biotechnology
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RSCB
PDB) provides a wide range of digital data regarding biology and biomedicine. This huge …
PDB) provides a wide range of digital data regarding biology and biomedicine. This huge …
Navigating transcriptomic connectivity map** workflows to link chemicals with bioactivities
Screening new compounds for potential bioactivities against cellular targets is vital for drug
discovery and chemical safety. Transcriptomics offers an efficient approach for assessing …
discovery and chemical safety. Transcriptomics offers an efficient approach for assessing …
In silico Prediction, Characterization, Molecular Docking, and Dynamic Studies on Fungal SDRs as Novel Targets for Searching Potential Fungicides Against …
Vascular wilt of tomato caused by Fusarium oxysporum f. sp. lycopersici (FOL) is one of the
most devastating diseases, that delimits the tomato production worldwide. Fungal short …
most devastating diseases, that delimits the tomato production worldwide. Fungal short …
Spectroscopic and quantum/classical mechanics based computational studies to compare the ability of andrographolide and its derivative to inhibit nitric oxide …
The inhibition of the enzyme Nitric Oxide Synthase by a bioactive compounds results in it
possessing anti-inflammatory property. The ability of Andrographolide and its derivative …
possessing anti-inflammatory property. The ability of Andrographolide and its derivative …
No dance, no partner! A tale of receptor flexibility in docking and virtual screening
Modern drug design relies on a detailed understanding of the molecular recognition process
by which biological partners such as a protein and a drug interact and bind to each other …
by which biological partners such as a protein and a drug interact and bind to each other …
Fragment-to-lead tailored in silico design
Fragment-based drug discovery (FBDD) emerged as a disruptive technology and became
established during the last two decades. Its rationality and low entry costs make it appealing …
established during the last two decades. Its rationality and low entry costs make it appealing …
Novel combinations of experimental and computational analysis tested on the binding of metalloprotoporphyrins to albumin
Abstract The evidence that Human Serum Albumin (HSA) binds metal ions and
organometallic compounds has generated interest in its physiological role as a …
organometallic compounds has generated interest in its physiological role as a …
[HTML][HTML] A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community)
Structural bioinformatics provides the scientific methods and tools to analyse, archive,
validate, and present the biomolecular structure data generated by the structural biology …
validate, and present the biomolecular structure data generated by the structural biology …
Graph Representation Learning for Interactive Biomolecule Systems
Advances in deep learning models have revolutionized the study of biomolecule systems
and their mechanisms. Graph representation learning, in particular, is important for …
and their mechanisms. Graph representation learning, in particular, is important for …
On identifying collective displacements in apo-proteins that reveal eventual binding pathways
Binding of small molecules to proteins often involves large conformational changes in the
latter, which open up pathways to the binding site. Observing and pinpointing these rare …
latter, which open up pathways to the binding site. Observing and pinpointing these rare …