Polysaccharide utilization loci: fueling microbial communities

JM Grondin, K Tamura, G Déjean, DW Abbott… - Journal of …, 2017 - journals.asm.org
The complex carbohydrates of terrestrial and marine biomass represent a rich nutrient
source for free-living and mutualistic microbes alike. The enzymatic saccharification of these …

Polysaccharide degradation by the intestinal microbiota and its influence on human health and disease

DW Cockburn, NM Koropatkin - Journal of molecular biology, 2016 - Elsevier
Carbohydrates comprise a large fraction of the typical diet, yet humans are only able to
directly process some types of starch and simple sugars. The remainder transits the large …

Environmental and Gut Bacteroidetes: The Food Connection

F Thomas, JH Hehemann, E Rebuffet… - Frontiers in …, 2011 - frontiersin.org
Members of the diverse bacterial phylum Bacteroidetes have colonized virtually all types of
habitats on Earth. They are among the major members of the microbiota of animals …

Carbon acquisition ecological strategies to connect soil microbial biodiversity and carbon cycling

EM Morrissey, J Kane, BM Tripathi, MSI Rion… - Soil Biology and …, 2023 - Elsevier
Soil carbon feedbacks to global change are uncertain, and the biological processes that
govern soil organic matter decomposition are not resolved in current ecosystem models …

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

NL Ward, JF Challacombe, PH Janssen… - Applied and …, 2009 - journals.asm.org
The complete genomes of three strains from the phylum Acidobacteria were compared.
Phylogenetic analysis placed them as a unique phylum. They share genomic traits with …

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

F Warnecke, P Luginbühl, N Ivanova, M Ghassemian… - Nature, 2007 - nature.com
From the standpoints of both basic research and biotechnology, there is considerable
interest in reaching a clearer understanding of the diversity of biological mechanisms …

Complex glycan catabolism by the human gut microbiota: the Bacteroidetes Sus-like paradigm

EC Martens, NM Koropatkin, TJ Smith… - Journal of Biological …, 2009 - jbc.org
Trillions of microbes inhabit the distal gut of adult humans. They have evolved to compete
efficiently for nutrients, including a wide array of chemically diverse, complex glycans …

Bacteroidetes as a sensitive biological indicator of agricultural soil usage revealed by a culture-independent approach

A Wolińska, A Kuźniar, U Zielenkiewicz, D Izak… - Applied Soil …, 2017 - Elsevier
The aim of the study was to determine the Bacteroidetes community structure in arable soils
versus wastelands in order to assess their sensitivity to agricultural soil usage. Twelve …

Microbial diversity of cellulose hydrolysis

DB Wilson - Current opinion in microbiology, 2011 - Elsevier
Enzymatic hydrolysis of cellulose by microorganisms is a key step in the global carbon cycle.
Despite its abundance only a small percentage of microorganisms can degrade cellulose …

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

D Martinez, J Challacombe, I Morgenstern… - Proceedings of the …, 2009 - pnas.org
Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and
are also largely responsible for the destructive decay of wooden structures. Rapid …