Empirical and philosophical problems with the subspecies rank
Species‐level taxonomy derives from empirical sources (data and techniques) that assess
the existence of spatiotemporal evolutionary lineages via various species “concepts.” These …
the existence of spatiotemporal evolutionary lineages via various species “concepts.” These …
What have we learned from the first 500 avian genomes?
The increased capacity of DNA sequencing has significantly advanced our understanding of
the phylogeny of birds and the proximate and ultimate mechanisms molding their genomic …
the phylogeny of birds and the proximate and ultimate mechanisms molding their genomic …
Three problems in the genetics of speciation by selection
Speciation is the process by which barriers to gene flow evolve between populations.
Although we now know that speciation is largely driven by natural selection, knowledge of …
Although we now know that speciation is largely driven by natural selection, knowledge of …
Genetics and the evolution of prezygotic isolation
The significance of prezygotic isolation for speciation has been recognized at least since the
Modern Synthesis. However, fundamental questions remain. For example, how are genetic …
Modern Synthesis. However, fundamental questions remain. For example, how are genetic …
Rapid adaptive radiation of Darwin's finches depends on ancestral genetic modules
Recent adaptive radiations are models for investigating mechanisms contributing to the
evolution of biodiversity. An unresolved question is the relative importance of new mutations …
evolution of biodiversity. An unresolved question is the relative importance of new mutations …
A supergene underlies linked variation in color and morphology in a Holarctic songbird
The genetic architecture of a phenotype can have considerable effects on the evolution of a
trait or species. Characterizing genetic architecture provides insight into the complexity of a …
trait or species. Characterizing genetic architecture provides insight into the complexity of a …
Hybrid origin of a primate, the gray snub-nosed monkey
Hybridization is widely recognized as promoting both species and phenotypic diversity.
However, its role in mammalian evolution is rarely examined. We report historical …
However, its role in mammalian evolution is rarely examined. We report historical …
A deep-learning approach for inference of selective sweeps from the ancestral recombination graph
Detecting signals of selection from genomic data is a central problem in population genetics.
Coupling the rich information in the ancestral recombination graph (ARG) with a powerful …
Coupling the rich information in the ancestral recombination graph (ARG) with a powerful …
Selective sweeps on different pigmentation genes mediate convergent evolution of island melanism in two incipient bird species
Insular organisms often evolve predictable phenotypes, like flightlessness, extreme body
sizes, or increased melanin deposition. The evolutionary forces and molecular targets …
sizes, or increased melanin deposition. The evolutionary forces and molecular targets …
The genomics of adaptation in birds
Organismal adaptations are the hallmark of natural selection. Studies of adaptations in avian
systems have been central to key conceptual and empirical advances in the field of …
systems have been central to key conceptual and empirical advances in the field of …