Understanding the invisible hands of sample preparation for cryo-EM

G Weissenberger, RJM Henderikx, PJ Peters - Nature Methods, 2021 - nature.com
Cryo-electron microscopy (cryo-EM) is rapidly becoming an attractive method in the field of
structural biology. With the exploding popularity of cryo-EM, sample preparation must evolve …

Microbial rhodopsins: diversity, mechanisms, and optogenetic applications

EG Govorunova, OA Sineshchekov, H Li… - Annual review of …, 2017 - annualreviews.org
Microbial rhodopsins are a family of photoactive retinylidene proteins widespread
throughout the microbial world. They are notable for their diversity of function, using …

Cryo-EM structure of human rhodopsin bound to an inhibitory G protein

Y Kang, O Kuybeda, PW de Waal, S Mukherjee… - Nature, 2018 - nature.com
G-protein-coupled receptors comprise the largest family of mammalian transmembrane
receptors. They mediate numerous cellular pathways by coupling with downstream …

A light-driven sodium ion pump in marine bacteria

K Inoue, H Ono, R Abe-Yoshizumi, S Yoshizawa… - Nature …, 2013 - nature.com
Light-driven proton-pum** rhodopsins are widely distributed in many microorganisms.
They convert sunlight energy into proton gradients that serve as energy source of the cell …

Frozen in time: analyzing molecular dynamics with time-resolved cryo-EM

SJ Amann, D Keihsler, T Bodrug, NG Brown… - Structure, 2023 - cell.com
Molecular machines, such as polymerases, ribosomes, or proteasomes, fulfill complex tasks
requiring the thermal energy of their environment. They achieve this by restricting random …

Time-resolved cryo-EM using a combination of droplet microfluidics with on-demand jetting

S Torino, M Dhurandhar, A Stroobants, R Claessens… - Nature …, 2023 - nature.com
Single-particle cryogenic electron microscopy (cryo-EM) allows reconstruction of high-
resolution structures of proteins in different conformations. Protein function often involves …

Structure of bacteriorhodopsin at 1.55 Å resolution

H Luecke, B Schobert, HT Richter, JP Cartailler… - Journal of molecular …, 1999 - Elsevier
The atomic structure of the light-driven ion pump bacteriorhodopsin and the surrounding
lipid matrix was determined by X-ray diffraction of crystals grown in cubic lipid phase. In the …

Structure and function of aquaporin water channels

AS Verkman, AK Mitra - American Journal of Physiology …, 2000 - journals.physiology.org
The aquaporins (AQPs) are a family of small membrane-spanning proteins (monomer size∼
30 kDa) that are expressed at plasma membranes in many cells types involved in fluid …

How soft is a protein? A protein dynamics force constant measured by neutron scattering

G Zaccai - Science, 2000 - science.org
An effective environmental force constant is introduced to quantify the molecular resilience
(or its opposite,“softness”) of a protein structure and relate it to biological function and …

Structural basis of perturbed pKa values of catalytic groups in enzyme active sites

TK Harris, GJ Turner - IUBMB life, 2002 - Wiley Online Library
In protein and RNA macromolecules, only a limited number of different side‐chain chemical
groups are available to function as catalysts. The myriad of enzyme‐catalyzed reactions …