Antibiotic failure: Beyond antimicrobial resistance

C de la Fuente-Nunez, A Cesaro… - Drug Resistance Updates, 2023 - Elsevier
Despite significant progress in antibiotic discovery, millions of lives are lost annually to
infections. Surprisingly, the failure of antimicrobial treatments to effectively eliminate …

Nanopore sequencing: Flourishing in its teenage years

T Zhang, H Li, M Jiang, H Hou, Y Gao, Y Li… - Journal of Genetics and …, 2024 - Elsevier
Over the past decade, nanopore sequencing has experienced significant advancements
and changes, transitioning from an initially emerging technology to a significant instrument …

Wekemo Bioincloud: A user‐friendly platform for meta‐omics data analyses

Y Gao, G Zhang, S Jiang, YX Liu - Imeta, 2024 - Wiley Online Library
The increasing application of meta‐omics approaches to investigate the structure, function,
and intercellular interactions of microbial communities has led to a surge in available data …

[HTML][HTML] Update on the gut microbiome in health and diseases

M Salvadori, G Rosso - World Journal of Methodology, 2024 - pmc.ncbi.nlm.nih.gov
The Human Microbiome Project, Earth Microbiome Project, and next-generation sequencing
have advanced novel genome association, host genetic linkages, and pathogen …

The gut microbiota‐aromatic hydrocarbon receptor (AhR) axis mediates the anticolitic effect of polyphenol‐rich extracts from Sanghuangporus

S Zhong, YQ Sun, JX Huo, WY Xu, YN Yang, JB Yang… - Imeta, 2024 - Wiley Online Library
Inflammatory bowel disease (IBD) is a significant global health concern. The gut microbiota
plays an essential role in the onset and development of IBD. Sanghuangporus (SH), a …

Vaginal microbiota are associated with in vitro fertilization during female infertility

T Wang, P Li, X Bai, S Tian, M Yang, D Leng, H Kui… - Imeta, 2024 - Wiley Online Library
The vaginal microbiome plays an essential role in the reproductive health of human females.
As infertility increases worldwide, understanding the roles that the vaginal microbiome may …

Evaluation of Safety and Beneficial Health Effects of the Human-Milk Strain Bifidobacterium breve DSM32583: An Infant Pilot Trial

C Alba, M Carrera, G Álvarez-Calatayud, R Arroyo… - Nutrients, 2024 - mdpi.com
Human milk promotes the growth of bifidobacteria in the infant gut. Adding bifidobacterial
species to infant formula may contribute to increasing their presence in the gut of formula-fed …

The Microbiome Protocols eBook initiative: Building a bridge to microbiome research

Y Gao, K Peng, D Bai, XY Bai, Y Bi, A Chen, B Chen… - 2024 - Wiley Online Library
The microbiome is a research area that focuses on studying the omics of the microbe [1] with
rapid development in the past few decades, making breakthroughs in understanding …

[HTML][HTML] The vaginal microbiota of healthy female cats

P Banchi, A Bertero, F Gionechetti, M Corrò… - Theriogenology, 2024 - Elsevier
The vaginal microbiota of the queen (ie, female cat) has never been described using culture
independent methods. The objectives of the present research were to describe the vaginal …

EasyMetagenome: A user‐friendly and flexible pipeline for shotgun metagenomic analysis in microbiome research

D Bai, T Chen, J Xun, C Ma, H Luo, H Yang, C Cao… - iMeta, 2025 - Wiley Online Library
Shotgun metagenomics has become a pivotal technology in microbiome research, enabling
in‐depth analysis of microbial communities at both the high‐resolution taxonomic and …