[HTML][HTML] Hypothesis testing and statistical analysis of microbiome

Y **a, J Sun - Genes & diseases, 2017 - Elsevier
After the initiation of Human Microbiome Project in 2008, various biostatistic and
bioinformatic tools for data analysis and computational methods have been developed and …

Food or just a free ride? A meta-analysis reveals the global diversity of the Plastisphere

RJ Wright, MGI Langille, TR Walker - The ISME Journal, 2021 - academic.oup.com
It is now indisputable that plastics are ubiquitous and problematic in ecosystems globally.
Many suggestions have been made about the role that biofilms colonizing plastics in the …

Adipose tissue derived bacteria are associated with inflammation in obesity and type 2 diabetes

L Massier, R Chakaroun, S Tabei, A Crane, KD Didt… - Gut, 2020 - gut.bmj.com
Objective Bacterial translocation to various organs including human adipose tissue (AT) due
to increased intestinal permeability remains poorly understood. We hypothesised that:(1) …

Diet leaves a genetic signature in a keystone member of the gut microbiota

T Dapa, RS Ramiro, MF Pedro, I Gordo, KB Xavier - Cell Host & Microbe, 2022 - cell.com
Switching from a low-fat and high-fiber diet to a Western-style high-fat and high-sugar diet
causes microbiota imbalances that underlay many pathological conditions (ie, dysbiosis) …

[HTML][HTML] Microbial pioneers of plastic colonisation in coastal seawaters

M Latva, CJ Dedman, RJ Wright, M Polin… - Marine Pollution …, 2022 - Elsevier
Plastics, when entering the environment, are immediately colonised by microorganisms.
This modifies their physico-chemical properties as well as their transport and fate in natural …

Gut microbiome and serum metabolome analyses identify molecular biomarkers and altered glutamate metabolism in fibromyalgia

M Clos-Garcia, N Andrés-Marin, G Fernández-Eulate… - …, 2019 - thelancet.com
Background Fibromyalgia is a complex, relatively unknown disease characterised by
chronic, widespread musculoskeletal pain. The gut-brain axis connects the gut microbiome …

Urbanized microbiota in infants, immune constitution, and later risk of atopic diseases

J Lehtimäki, J Thorsen, MA Rasmussen… - Journal of Allergy and …, 2021 - Elsevier
Background Urbanization is linked with an increased burden of asthma and atopic traits. A
putative mechanism is insufficient exposure to beneficial microbes early in life, leading to …

Differential response of digesta-and mucosa-associated intestinal microbiota to dietary insect meal during the seawater phase of Atlantic salmon

Y Li, L Bruni, A Jaramillo-Torres, K Gajardo… - Animal Microbiome, 2021 - Springer
Background Intestinal digesta is commonly used for studying responses of microbiota to
dietary shifts, yet evidence is accumulating that it represents an incomplete view of the …

Tree diversity and soil chemical properties drive the linkages between soil microbial community and ecosystem functioning

R Beugnon, J Du, S Cesarz, SD Jurburg… - ISME …, 2021 - academic.oup.com
Microbial respiration is critical for soil carbon balance and ecosystem functioning. Previous
studies suggest that plant diversity influences soil microbial communities and their …

Microbial communities of the house fly Musca domestica vary with geographical location and habitat

R Park, MC Dzialo, S Spaepen, D Nsabimana… - Microbiome, 2019 - Springer
House flies (Musca domestica) are widespread, synanthropic filth flies commonly found on
decaying matter, garbage, and feces as well as human food. They have been shown to …