Microbial ecology of the cryosphere: sea ice and glacial habitats

A Boetius, AM Anesio, JW Deming, JA Mikucki… - Nature Reviews …, 2015‏ - nature.com
The Earth's cryosphere comprises those regions that are cold enough for water to turn into
ice. Recent findings show that the icy realms of polar oceans, glaciers and ice sheets are …

[HTML][HTML] Microbial community composition of the Antarctic ecosystems: review of the bacteria, fungi, and archaea identified through an NGS-based metagenomics …

VV Doytchinov, SG Dimov - Life, 2022‏ - mdpi.com
Antarctica represents a unique environment, both due to the extreme meteorological and
geological conditions that govern it and the relative isolation from human influences that …

Flavonoid-attracted Aeromonas sp. from the Arabidopsis root microbiome enhances plant dehydration resistance

D He, SK Singh, L Peng, R Kaushal, JI Vílchez… - The ISME …, 2022‏ - academic.oup.com
Flavonoids are stress-inducible metabolites important for plant-microbe interactions. In
contrast to their well-known function in initiating rhizobia nodulation in legumes, little is …

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

S Takahashi, J Tomita, K Nishioka, T Hisada… - PloS one, 2014‏ - journals.plos.org
For the analysis of microbial community structure based on 16S rDNA sequence diversity,
sensitive and robust PCR amplification of 16S rDNA is a critical step. To obtain accurate …

Comparison of two 16S rRNA primers (V3–V4 and V4–V5) for studies of arctic microbial communities

E Fadeev, MG Cardozo-Mino, JZ Rapp… - Frontiers in …, 2021‏ - frontiersin.org
Microbial communities of the Arctic Ocean are poorly characterized in comparison to other
aquatic environments as to their horizontal, vertical, and temporal turnover. Yet, recent …

Intragenomic heterogeneity of 16S rRNA genes causes overestimation of prokaryotic diversity

DL Sun, X Jiang, QL Wu, NY Zhou - Applied and environmental …, 2013‏ - journals.asm.org
ABSTRACT Ever since Carl Woese introduced the use of 16S rRNA genes for determining
the phylogenetic relationships of prokaryotes, this method has been regarded as the “gold …

Unveiling the impact of microplastics with distinct polymer types and concentrations on tidal sediment microbiome and nitrogen cycling

C Fang, Y Yang, S Zhang, Y He, S Pan, L Zhou… - Journal of Hazardous …, 2024‏ - Elsevier
Microplastics (MPs) are distributed widely in the ocean surface waters and sediments.
Increasing MPs contamination in intertidal zone profoundly impacts microbial ecosystem …

Evaluation of different 16S rRNA gene V regions for exploring bacterial diversity in a eutrophic freshwater lake

J Zhang, X Ding, R Guan, C Zhu, C Xu, B Zhu… - Science of the Total …, 2018‏ - Elsevier
Massive partial sequencing of 16S rRNA genes has become the predominant tool used for
studying microbial ecology. However, determining which hypervariable regions and primer …

[HTML][HTML] Bioinformatics accelerates the major tetrad: a real boost for the pharmaceutical industry

T Behl, I Kaur, A Sehgal, S Singh, S Bhatia… - International Journal of …, 2021‏ - mdpi.com
With advanced technology and its development, bioinformatics is one of the avant-garde
fields that has managed to make amazing progress in the pharmaceutical–medical field by …