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Bacteriophages and their genomes
GF Hatfull, RW Hendrix - Current opinion in virology, 2011 - Elsevier
Bacteriophages occupy a unique position in biology, representing an absolute majority of all
organisms in the biosphere. Because their genomes are relatively small, elucidating the …
organisms in the biosphere. Because their genomes are relatively small, elucidating the …
Mycobacteriophages: from petri dish to patient
GF Hatfull - PLoS pathogens, 2022 - journals.plos.org
Mycobacteriophages—bacteriophages infecting Mycobacterium hosts—contribute
substantially to our understanding of viral diversity and evolution, provide resources for …
substantially to our understanding of viral diversity and evolution, provide resources for …
[BOG][B] Discipline-based education research: Understanding and improving learning in undergraduate science and engineering
HA Schweingruber, NR Nielsen, SR Singer - 2012 - books.google.com
The National Science Foundation funded a synthesis study on the status, contributions, and
future direction of discipline-based education research (DBER) in physics, biological …
future direction of discipline-based education research (DBER) in physics, biological …
Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages
Microbial sulfur metabolism contributes to biogeochemical cycling on global scales. Sulfur
metabolizing microbes are infected by phages that can encode auxiliary metabolic genes …
metabolizing microbes are infected by phages that can encode auxiliary metabolic genes …
Bacteriophage evolution differs by host, lifestyle and genome
TN Mavrich, GF Hatfull - Nature Microbiology, 2017 - nature.com
Bacteriophages play key roles in microbial evolution 1, 2, marine nutrient cycling 3 and
human disease 4. Phages are genetically diverse, and their genome architectures are …
human disease 4. Phages are genetically diverse, and their genome architectures are …
A broadly implementable research course in phage discovery and genomics for first-year undergraduate students
Engaging large numbers of undergraduates in authentic scientific discovery is desirable but
difficult to achieve. We have developed a general model in which faculty and teaching …
difficult to achieve. We have developed a general model in which faculty and teaching …
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies
Prophages are phages in lysogeny that are integrated into, and replicated as part of, the
host bacterial genome. These mobile elements can have tremendous impact on their …
host bacterial genome. These mobile elements can have tremendous impact on their …
Prophage-mediated defence against viral attack and viral counter-defence
Temperate phages are common, and prophages are abundant residents of sequenced
bacterial genomes. Mycobacteriophages are viruses that infect mycobacterial hosts …
bacterial genomes. Mycobacteriophages are viruses that infect mycobacterial hosts …
Phamerator: a bioinformatic tool for comparative bacteriophage genomics
Background Bacteriophage genomes have mosaic architectures and are replete with small
open reading frames of unknown function, presenting challenges in their annotation …
open reading frames of unknown function, presenting challenges in their annotation …
Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism
Cyanophages infecting the marine cyanobacteria Prochlorococcus and Synechococcus
encode and express genes for the photosynthetic light reactions. Sequenced cyanophage …
encode and express genes for the photosynthetic light reactions. Sequenced cyanophage …