Saliva as a sample type for SARS-CoV-2 detection: implementation successes and opportunities around the globe

ER Tobik, LB Kitfield-Vernon, RJ Thomas… - Expert Review of …, 2022 - Taylor & Francis
Introduction Symptomatic testing and asymptomatic screening for SARS-CoV-2 continue to
be essential tools for mitigating virus transmission. Though COVID-19 diagnostics initially …

Evaluating and optimizing Acid-pH and Direct Lysis RNA extraction for SARS-CoV-2 RNA detection in whole saliva

B LaBute, J Fong, F Ziaee, R Gombar, M Stover… - Scientific Reports, 2024 - nature.com
COVID-19 has been a global public health and economic challenge. Screening for the
SARS-CoV-2 virus has been a key part of disease mitigation while the world continues to …

Genomic surveillance identifies potential risk factors for SARS-CoV-2 transmission at a mid-sized university in a small rural town

KR Andrews, DD New, DS Gour, K Francetich… - Scientific Reports, 2023 - nature.com
Understanding transmission dynamics of SARS-CoV-2 in institutions of higher education
(IHEs) is important because these settings have potential for rapid viral spread. Here, we …

Repurposing a SARS-CoV-2 surveillance program for infectious respiratory diseases in a university setting

KL King, R Ham, A Smothers, I Lee, T Bowie… - Frontiers in Public …, 2023 - frontiersin.org
Standard multiplex RT-qPCR diagnostic tests use nasopharyngeal swabs to simultaneously
detect a variety of infections, but commercially available kits can be expensive and have …

Identifying SARS-CoV-2 variants of concern through saliva-based RT-qPCR by targeting recurrent mutation sites

RE Ham, AR Smothers, R Che, KJ Sell… - Microbiology …, 2022 - journals.asm.org
ABSTRACT SARS-CoV-2 variants of concern (VOCs) continue to pose a public health threat
which necessitates a real-time monitoring strategy to complement whole genome …

Genomic surveillance identifies SARS-CoV-2 transmission patterns in local university populations, Wisconsin, USA, 2020–2022

A Ramaiah, M Khubbar, A Bauer, S Scott… - Microbial …, 2023 - microbiologyresearch.org
Novel variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) continue
to emerge as the coronavirus disease 2019 (COVID-19) pandemic extends into its fourth …

Investigating the rise of Omicron variant through genomic surveillance of SARS-CoV-2 infections in a highly vaccinated university population

II Ciubotariu, RP Wilkes, JJ Kattoor… - Microbial …, 2024 - microbiologyresearch.org
Novel variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) continue
to emerge as the coronavirus disease 2019 (COVID-19) pandemic extends into its fourth …

Genomic surveillance of SARS-CoV-2 in a university community: insights into tracking variants, transmission, and spread of Gamma (P. 1) variant

II Ciubotariu, J Dorman, NM Perry… - Open forum …, 2022 - academic.oup.com
Background Using a combination of data from routine surveillance, genomic sequencing,
and phylogeographic analysis, we tracked the spread and introduction events of severe …

INVESTIGATING INFECTIOUS DISEASE DYNAMICS USING PATHOGEN GENOMICS IN APPLIED PUBLIC HEALTH SETTINGS

II Ciubotariu - 2023 - hammer.purdue.edu
Infectious diseases are caused by a multitude of organisms, ranging from viruses to bacteria,
from parasites to fungi, and can be passed directly or indirectly from one person to another …

Undergraduate Teaching During COVID-19

C Gentry-Weeks, DR Ciaravola, M Barker, K Long… - Applied …, 2022 - liebertpub.com
Introduction: Universities were challenged during the COVID-19 pandemic to continue
providing quality education for their students while navigating the uncertainties of the SARS …