Alternative splicing at the intersection of biological timing, development, and stress responses
D Staiger, JWS Brown - The Plant Cell, 2013 - academic.oup.com
High-throughput sequencing for transcript profiling in plants has revealed that alternative
splicing (AS) affects a much higher proportion of the transcriptome than was previously …
splicing (AS) affects a much higher proportion of the transcriptome than was previously …
[HTML][HTML] Alternative splicing in plants–coming of age
More than 60% of intron-containing genes undergo alternative splicing (AS) in plants. This
number will increase when AS in different tissues, developmental stages, and environmental …
number will increase when AS in different tissues, developmental stages, and environmental …
Arabidopsis MYB4 plays dual roles in flavonoid biosynthesis
XC Wang, J Wu, ML Guan, CH Zhao, P Geng… - The Plant …, 2020 - Wiley Online Library
Flavonoids are major secondary metabolites derived from the plant phenylpropanoid
pathway that play important roles in plant development and also have benefits for human …
pathway that play important roles in plant development and also have benefits for human …
Rapid and dynamic alternative splicing impacts the Arabidopsis cold response transcriptome
CPG Calixto, W Guo, AB James, NA Tzioutziou… - The Plant …, 2018 - academic.oup.com
Plants have adapted to tolerate and survive constantly changing environmental conditions
by reprogramming gene expression The dynamics of the contribution of alternative splicing …
by reprogramming gene expression The dynamics of the contribution of alternative splicing …
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
R Zhang, CPG Calixto, Y Marquez… - Nucleic acids …, 2017 - academic.oup.com
Alternative splicing generates multiple transcript and protein isoforms from the same gene
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
Long noncoding RNA modulates alternative splicing regulators in Arabidopsis
F Bardou, F Ariel, CG Simpson, N Romero-Barrios… - Developmental cell, 2014 - cell.com
Alternative splicing (AS) of pre-mRNA represents a major mechanism underlying increased
transcriptome and proteome complexity. Here, we show that the nuclear speckle RNA …
transcriptome and proteome complexity. Here, we show that the nuclear speckle RNA …
Alternative splicing in plant genes: a means of regulating the environmental fitness of plants
X Shang, Y Cao, L Ma - International journal of molecular sciences, 2017 - mdpi.com
Gene expression can be regulated through transcriptional and post-transcriptional
mechanisms. Transcription in eukaryotes produces pre-mRNA molecules, which are …
mechanisms. Transcription in eukaryotes produces pre-mRNA molecules, which are …
Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination
Background Seed germination involves progression from complete metabolic dormancy to a
highly active, growing seedling. Many factors regulate germination and these interact …
highly active, growing seedling. Many factors regulate germination and these interact …
ABA mediates plant development and abiotic stress via alternative splicing
X Yang, Z Jia, Q Pu, Y Tian, F Zhu, Y Liu - International Journal of …, 2022 - mdpi.com
Alternative splicing (AS) exists in eukaryotes to increase the complexity and adaptability of
systems under biophysiological conditions by increasing transcriptional and protein …
systems under biophysiological conditions by increasing transcriptional and protein …
SKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis
X Wang, F Wu, Q **e, H Wang, Y Wang, Y Yue… - The Plant …, 2012 - academic.oup.com
Circadian clocks generate endogenous rhythms in most organisms from cyanobacteria to
humans and facilitate entrainment to environmental diurnal cycles, thus conferring a fitness …
humans and facilitate entrainment to environmental diurnal cycles, thus conferring a fitness …