Prokaryotic nucleotide excision repair: the UvrABC system

JJ Truglio, DL Croteau, B Van Houten… - Chemical reviews, 2006 - ACS Publications
DNA is the molecule chosen by nature to store the information required to build organisms.
These organisms in turn serve to replicate that information. It was initially thought that DNA …

Prokaryotic nucleotide excision repair

C Kisker, J Kuper… - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
Nucleotide excision repair (NER) has allowed bacteria to flourish in many different niches
around the globe that inflict harsh environmental damage to their genetic material. NER is …

Arabidopsis EXECUTER1 interacts with WRKY transcription factors to mediate plastid-to-nucleus singlet oxygen signaling

Y Li, H Liu, T Ma, J Li, J Yuan, YC Xu, R Sun… - The Plant …, 2023 - academic.oup.com
Chloroplasts produce singlet oxygen (1O2), which causes changes in nuclear gene
expression through plastid-to-nucleus retrograde signaling to increase plant fitness …

XPB and XPD helicases in TFIIH orchestrate DNA duplex opening and damage verification to coordinate repair with transcription and cell cycle via CAK kinase

JO Fuss, JA Tainer - DNA repair, 2011 - Elsevier
Helicases must unwind DNA at the right place and time to maintain genomic integrity or
gene expression. Biologically critical XPB and XPD helicases are key members of the …

Collaborative dynamic DNA scanning by nucleotide excision repair proteins investigated by single-molecule imaging of quantum-dot-labeled proteins

NM Kad, H Wang, GG Kennedy, DM Warshaw… - Molecular cell, 2010 - cell.com
How DNA repair proteins sort through a genome for damage is one of the fundamental
unanswered questions in this field. To address this problem, we uniquely labeled bacterial …

Adaptation in Bacillus cereus: From Stress to Disease

C Duport, M Jobin, P Schmitt - Frontiers in Microbiology, 2016 - frontiersin.org
Bacillus cereus is a food-borne pathogen that causes diarrheal disease in humans. After
ingestion, B. cereus experiences in the human gastro-intestinal tract abiotic physical …

Alternaria TeA toxin activates a chloroplast retrograde signaling pathway to facilitate JA-dependent pathogenicity

J Shi, H Wang, M Li, L Mi, Y Gao, S Qiang, Y Zhang… - Plant …, 2024 - cell.com
The chloroplast is a critical battleground in the arms race between plants and pathogens.
Among microbe-secreted mycotoxins, tenuazonic acid (TeA), produced by the genus …

'Close-fitting sleeves': DNA damage recognition by the UvrABC nuclease system

B Van Houten, DL Croteau, MJ DellaVecchia… - Mutation Research …, 2005 - Elsevier
DNA damage recognition represents a long-standing problem in the field of protein–DNA
interactions. This article reviews our current knowledge of how damage recognition is …

Structural basis for DNA recognition and processing by UvrB

JJ Truglio, E Karakas, B Rhau, H Wang… - Nature structural & …, 2006 - nature.com
DNA-damage recognition in the nucleotide excision repair (NER) cascade is a complex
process, operating on a wide variety of damages. UvrB is the central component in …

EXECUTER1 and singlet oxygen signaling: A reassessment of nuclear activity

K Liu, H Zhao, KP Lee, Q Yu, M Di, L Wang… - The Plant …, 2025 - academic.oup.com
Chloroplasts are recognized as environmental sensors, capable of translating
environmental fluctuations into diverse signals to communicate with the nucleus. Among the …