The dawn of spatial omics

D Bressan, G Battistoni, GJ Hannon - Science, 2023 - science.org
Spatial omics has been widely heralded as the new frontier in life sciences. This term
encompasses a wide range of techniques that promise to transform many areas of biology …

CD8+ T cells in the cancer-immunity cycle

JR Giles, AM Globig, SM Kaech, EJ Wherry - Immunity, 2023 - cell.com
CD8+ T cells are end effectors of cancer immunity. Most forms of effective cancer
immunotherapy involve CD8+ T cell effector function. Here, we review the current …

Liver tumour immune microenvironment subtypes and neutrophil heterogeneity

R Xue, Q Zhang, Q Cao, R Kong, X **ang, H Liu… - Nature, 2022 - nature.com
The heterogeneity of the tumour immune microenvironment (TIME), organized by various
immune and stromal cells, is a major contributing factor of tumour metastasis, relapse and …

Single-cell spatial immune landscapes of primary and metastatic brain tumours

E Karimi, MW Yu, SM Maritan, LJM Perus… - Nature, 2023 - nature.com
Single-cell technologies have enabled the characterization of the tumour microenvironment
at unprecedented depth and have revealed vast cellular diversity among tumour cells and …

Hallmarks of transcriptional intratumour heterogeneity across a thousand tumours

A Gavish, M Tyler, AC Greenwald, R Hoefflin, D Simkin… - Nature, 2023 - nature.com
Each tumour contains diverse cellular states that underlie intratumour heterogeneity (ITH), a
central challenge of cancer therapeutics. Dozens of recent studies have begun to describe …

Spatial profiling technologies illuminate the tumor microenvironment

O Elhanani, R Ben-Uri, L Keren - Cancer cell, 2023 - cell.com
The tumor microenvironment (TME) is composed of many different cellular and acellular
components that together drive tumor growth, invasion, metastasis, and response to …

Single-cell spatial landscapes of the lung tumour immune microenvironment

M Sorin, M Rezanejad, E Karimi, B Fiset, L Desharnais… - Nature, 2023 - nature.com
Single-cell technologies have revealed the complexity of the tumour immune
microenvironment with unparalleled resolution,,,,,,,–. Most clinical strategies rely on …

A neutrophil response linked to tumor control in immunotherapy

J Gungabeesoon, NA Gort-Freitas, M Kiss, E Bolli… - Cell, 2023 - cell.com
Neutrophils accumulate in solid tumors, and their abundance correlates with poor prognosis.
Neutrophils are not homogeneous, however, and could play different roles in cancer …

The emerging landscape of spatial profiling technologies

JR Moffitt, E Lundberg, H Heyn - Nature Reviews Genetics, 2022 - nature.com
Improved scale, multiplexing and resolution are establishing spatial nucleic acid and protein
profiling methods as a major pillar for cellular atlas building of complex samples, from …

Multistain deep learning for prediction of prognosis and therapy response in colorectal cancer

S Foersch, C Glasner, AC Woerl, M Eckstein… - Nature medicine, 2023 - nature.com
Although it has long been known that the immune cell composition has a strong prognostic
and predictive value in colorectal cancer (CRC), scoring systems such as the immunoscore …