Diagnosis of invasive fungal infections: challenges and recent developments
W Fang, J Wu, M Cheng, X Zhu, M Du, C Chen… - Journal of biomedical …, 2023 - Springer
Background The global burden of invasive fungal infections (IFIs) has shown an upsurge in
recent years due to the higher load of immunocompromised patients suffering from various …
recent years due to the higher load of immunocompromised patients suffering from various …
Fungal diversity revisited: 2.2 to 3.8 million species
The question of how many species of Fungi there are has occasioned much speculation,
with figures mostly posited from around half a million to 10 million, and in one extreme case …
with figures mostly posited from around half a million to 10 million, and in one extreme case …
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher …
Species identification lies at the heart of biodiversity studies that has in recent years
favoured DNA-based approaches. Microbial Biological Resource Centres are a rich source …
favoured DNA-based approaches. Microbial Biological Resource Centres are a rich source …
A few Ascomycota taxa dominate soil fungal communities worldwide
Despite having key functions in terrestrial ecosystems, information on the dominant soil fungi
and their ecological preferences at the global scale is lacking. To fill this knowledge gap, we …
and their ecological preferences at the global scale is lacking. To fill this knowledge gap, we …
Fungal identification using molecular tools: a primer for the natural products research community
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …
are known to produce numerous bioactive molecules, which makes them very useful for …
Assessment of BOLD and GenBank–Their accuracy and reliability for the identification of biological materials
KA Meiklejohn, N Damaso, JM Robertson - PloS one, 2019 - journals.plos.org
Taxonomic identification of biological materials can be achieved through DNA barcoding,
where an unknown “barcode” sequence is compared to a reference database. In many …
where an unknown “barcode” sequence is compared to a reference database. In many …
Tag jumps illuminated–reducing sequence‐to‐sample misidentifications in metabarcoding studies
Metabarcoding of environmental samples on second‐generation sequencing platforms has
rapidly become a valuable tool for ecological studies. A fundamental assumption of this …
rapidly become a valuable tool for ecological studies. A fundamental assumption of this …
[PDF][PDF] Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi
Rapid development of high-throughput (HTS) molecular identification methods has
revolutionized our knowledge about taxonomic diversity and ecology of fungi. However …
revolutionized our knowledge about taxonomic diversity and ecology of fungi. However …
[HTML][HTML] ITS alchemy: on the use of ITS as a DNA marker in fungal ecology
H Kauserud - Fungal Ecology, 2023 - Elsevier
High throughput sequencing of PCR amplicons derived from environmental DNA (aka DNA
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …