Transcription regulation by long non-coding RNAs: mechanisms and disease relevance

J Ferrer, N Dimitrova - Nature Reviews Molecular Cell Biology, 2024 - nature.com
Long non-coding RNAs (lncRNAs) outnumber protein-coding transcripts, but their functions
remain largely unknown. In this Review, we discuss the emerging roles of lncRNAs in the …

Identification of RNA structures and their roles in RNA functions

X Cao, Y Zhang, Y Ding, Y Wan - Nature Reviews Molecular Cell …, 2024 - nature.com
The development of high-throughput RNA structure profiling methods in the past decade has
greatly facilitated our ability to map and characterize different aspects of RNA structures …

Towards targeting transposable elements for cancer therapy

Y Liang, X Qu, NM Shah, T Wang - Nature Reviews Cancer, 2024 - nature.com
Transposable elements (TEs) represent almost half of the human genome. Historically
deemed 'junk DNA', recent technological advancements have stimulated a wave of research …

Inverted Alu repeats: friends or foes in the human transcriptome

K Lee, J Ku, D Ku, Y Kim - Experimental & Molecular Medicine, 2024 - nature.com
Alu elements are highly abundant primate-specific short interspersed nuclear elements that
account for~ 10% of the human genome. Due to their preferential location in gene-rich …

Functional variants in a TTTG microsatellite on 15q26. 1 cause familial nonautoimmune thyroid abnormalities

S Narumi, K Nagasaki, M Kiriya, E Uehara, K Akiba… - Nature …, 2024 - nature.com
Insufficient thyroid hormone production in newborns is referred to as congenital
hypothyroidism. Multinodular goiter (MNG), characterized by an enlarged thyroid gland with …

[HTML][HTML] (Alternative) transcription start sites as regulators of RNA processing

C Alfonso-Gonzalez, V Hilgers - Trends in Cell Biology, 2024 - cell.com
Alternative transcription start site usage (ATSS) is a widespread regulatory strategy that
enables genes to choose between multiple genomic loci for initiating transcription. This …

Regulatory landscape of enhancer-mediated transcriptional activation

K Kawasaki, T Fukaya - Trends in Cell Biology, 2024 - cell.com
Enhancers are noncoding regulatory elements that instruct spatial and temporal specificity of
gene transcription in response to a variety of intrinsic and extrinsic signals during …

Molecular insights into regulatory RNAs in the cellular machinery

S Yang, SH Kim, E Yang, M Kang, JY Joo - Experimental & Molecular …, 2024 - nature.com
It is apparent that various functional units within the cellular machinery are derived from
RNAs. The evolution of sequencing techniques has resulted in significant insights into …

SARS-CoV-2 RNA stabilizes host mRNAs to elicit immunopathogenesis

H Zhao, Z Cai, J Rao, D Wu, L Ji, R Ye, D Wang… - Molecular cell, 2024 - cell.com
SARS-CoV-2 RNA interacts with host factors to suppress interferon responses and
simultaneously induces cytokine release to drive the development of severe coronavirus …

[HTML][HTML] Approaches to probe and perturb long noncoding RNA functions in diseases

G Wang, Y Lee-Yow, HY Chang - Current Opinion in Genetics & …, 2024 - Elsevier
Long noncoding RNAs (lncRNAs) are a class of RNA molecules exceeding 200 nucleotides
in length that lack long open-reading frames. Transcribed predominantly by RNA …