QSAR without borders

EN Muratov, J Bajorath, RP Sheridan… - Chemical Society …, 2020 - pubs.rsc.org
Prediction of chemical bioactivity and physical properties has been one of the most
important applications of statistical and more recently, machine learning and artificial …

Utilizing graph machine learning within drug discovery and development

T Gaudelet, B Day, AR Jamasb, J Soman… - Briefings in …, 2021 - academic.oup.com
Graph machine learning (GML) is receiving growing interest within the pharmaceutical and
biotechnology industries for its ability to model biomolecular structures, the functional …

[HTML][HTML] Machine learning in chemical engineering: strengths, weaknesses, opportunities, and threats

MR Dobbelaere, PP Plehiers, R Van de Vijver… - Engineering, 2021 - Elsevier
Chemical engineers rely on models for design, research, and daily decision-making, often
with potentially large financial and safety implications. Previous efforts a few decades ago to …

Deep learning for drug repurposing: Methods, databases, and applications

X Pan, X Lin, D Cao, X Zeng, PS Yu… - Wiley …, 2022 - Wiley Online Library
Drug development is time‐consuming and expensive. Repurposing existing drugs for new
therapies is an attractive solution that accelerates drug development at reduced …

Computing graph neural networks: A survey from algorithms to accelerators

S Abadal, A Jain, R Guirado, J López-Alonso… - ACM Computing …, 2021 - dl.acm.org
Graph Neural Networks (GNNs) have exploded onto the machine learning scene in recent
years owing to their capability to model and learn from graph-structured data. Such an ability …

Smiles-bert: large scale unsupervised pre-training for molecular property prediction

S Wang, Y Guo, Y Wang, H Sun, J Huang - Proceedings of the 10th ACM …, 2019 - dl.acm.org
With the rapid progress of AI in both academia and industry, Deep Learning has been widely
introduced into various areas in drug discovery to accelerate its pace and cut R&D costs …

Polypharmacology by design: a medicinal chemist's perspective on multitargeting compounds

E Proschak, H Stark, D Merk - Journal of medicinal chemistry, 2018 - ACS Publications
Multitargeting compounds comprising activity on more than a single biological target have
gained remarkable relevance in drug discovery owing to the complexity of multifactorial …

Convolutional networks on graphs for learning molecular fingerprints

DK Duvenaud, D Maclaurin… - Advances in neural …, 2015 - proceedings.neurips.cc
We introduce a convolutional neural network that operates directly on graphs. These
networks allow end-to-end learning of prediction pipelines whose inputs are graphs of …

Graph convolutional networks for computational drug development and discovery

M Sun, S Zhao, C Gilvary, O Elemento… - Briefings in …, 2020 - academic.oup.com
Despite the fact that deep learning has achieved remarkable success in various domains
over the past decade, its application in molecular informatics and drug discovery is still …

Artificial intelligence in drug design

G Hessler, KH Baringhaus - Molecules, 2018 - mdpi.com
Artificial Intelligence (AI) plays a pivotal role in drug discovery. In particular artificial neural
networks such as deep neural networks or recurrent networks drive this area. Numerous …