Metabolic engineering advances and prospects for amino acid production

VF Wendisch - Metabolic engineering, 2020 - Elsevier
Amino acid fermentation is one of the major pillars of industrial biotechnology. The multi-
billion USD amino acid market is rising steadily and is diversifying. Metabolic engineering is …

Experimental design, population dynamics, and diversity in microbial experimental evolution

B Van den Bergh, T Swings, M Fauvart… - … and Molecular Biology …, 2018 - journals.asm.org
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …

Synthetically-primed adaptation of Pseudomonas putida to a non-native substrate D-xylose

P Dvořák, B Burýšková, B Popelářová, BE Ebert… - Nature …, 2024 - nature.com
To broaden the substrate scope of microbial cell factories towards renewable substrates,
rational genetic interventions are often combined with adaptive laboratory evolution (ALE) …

Co-utilization of carbon sources in microorganisms for the bioproduction of chemicals

Q Ma, J Yi, Y Tang, Z Geng, C Zhang, W Sun… - Biotechnology …, 2024 - Elsevier
Carbon source is crucial for the cell growth and metabolism in microorganisms, and its
utilization significantly affects the synthesis efficiency of target products in microbial cell …

Mechanism of escape from the antibacterial activity of metal-based nanoparticles in clinically relevant bacteria: a systematic review

MF Salas-Orozco, AC Lorenzo-Leal… - … , Biology and Medicine, 2024 - Elsevier
The emergency of antibiotic-resistant bacteria in severe infections is increasing, especially
in nosocomial environments. The ESKAPE group is of special importance in the groups of …

Biosensor-driven adaptive laboratory evolution of l-valine production in Corynebacterium glutamicum

R Mahr, C Gätgens, J Gätgens, T Polen… - Metabolic …, 2015 - Elsevier
Adaptive laboratory evolution has proven a valuable strategy for metabolic engineering.
Here, we established an experimental evolution approach for improving microbial …

Adaptive laboratory evolution of a genome-reduced Escherichia coli

D Choe, JH Lee, M Yoo, S Hwang, BH Sung… - Nature …, 2019 - nature.com
Synthetic biology aims to design and construct bacterial genomes harboring the minimum
number of genes required for self-replicable life. However, the genome-reduced bacteria …

Evolution of Escherichia coli to 42 °C and Subsequent Genetic Engineering Reveals Adaptive Mechanisms and Novel Mutations

TE Sandberg, M Pedersen, RA LaCroix… - Molecular biology …, 2014 - academic.oup.com
Adaptive laboratory evolution (ALE) has emerged as a valuable method by which to
investigate microbial adaptation to a desired environment. Here, we performed ALE to 42° C …

Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum

L Tian, B Papanek, DG Olson, T Rydzak… - Biotechnology for …, 2016 - Springer
Background Biofuel production from plant cell walls offers the potential for sustainable and
economically attractive alternatives to petroleum-based products. Fuels from cellulosic …

Optimality and sub-optimality in a bacterial growth law

BD Towbin, Y Korem, A Bren, S Doron, R Sorek… - Nature …, 2017 - nature.com
Organisms adjust their gene expression to improve fitness in diverse environments. But
finding the optimal expression in each environment presents a challenge. We ask how good …