Antibiotic resistance in wastewater treatment plants: Tackling the black box
Wastewater is among the most important reservoirs of antibiotic resistance in urban
environments. The abundance of carbon sources and other nutrients, a variety of possible …
environments. The abundance of carbon sources and other nutrients, a variety of possible …
[HTML][HTML] Monitoring antibiotic resistance genes in wastewater environments: the challenges of filling a gap in the One-Health cycle
Antibiotic resistance (AR) is a global problem requiring international cooperation and
coordinated action. Global monitoring must rely on methods available and comparable …
coordinated action. Global monitoring must rely on methods available and comparable …
Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge
Background There is concern that the microbially rich activated sludge environment of
wastewater treatment plants (WWTPs) may contribute to the dissemination of antibiotic …
wastewater treatment plants (WWTPs) may contribute to the dissemination of antibiotic …
Recommendations for the use of metagenomics for routine monitoring of antibiotic resistance in wastewater and impacted aquatic environments
Shotgun metagenomic sequencing of the collective genomic information carried across
microbial communities is emerging as a powerful approach for monitoring antibiotic …
microbial communities is emerging as a powerful approach for monitoring antibiotic …
Using sewage for surveillance of antimicrobial resistance
FM Aarestrup, MEJ Woolhouse - Science, 2020 - science.org
Antimicrobial resistance (AMR), a cross-cutting and increasing threat to global health (1–3),
is a complex problem with multiple and interconnected drivers. Reliable surveillance data …
is a complex problem with multiple and interconnected drivers. Reliable surveillance data …
A framework for standardized qPCR-targets and protocols for quantifying antibiotic resistance in surface water, recycled water and wastewater
Water environments are increasingly recognized as a conduit for the spread of antibiotic
resistance, but there is need to standardize antibiotic resistance monitoring protocols to …
resistance, but there is need to standardize antibiotic resistance monitoring protocols to …
Whole genome sequencing and metagenomics for outbreak investigation, source attribution and risk assessment of food‐borne microorganisms
EFSA Panel on Biological Hazards (EFSA … - Efsa …, 2019 - Wiley Online Library
This Opinion considers the application of whole genome sequencing (WGS) and
metagenomics for outbreak investigation, source attribution and risk assessment of food …
metagenomics for outbreak investigation, source attribution and risk assessment of food …
The present and future of whole genome sequencing (WGS) and whole metagenome sequencing (WMS) for surveillance of antimicrobial resistant microorganisms …
EA Oniciuc, E Likotrafiti, A Alvarez-Molina, M Prieto… - Genes, 2018 - mdpi.com
Antimicrobial resistance (AMR) surveillance is a critical step within risk assessment
schemes, as it is the basis for informing global strategies, monitoring the effectiveness of …
schemes, as it is the basis for informing global strategies, monitoring the effectiveness of …
Critical evaluation of short, long, and hybrid assembly for contextual analysis of antibiotic resistance genes in complex environmental metagenomes
In the fight to limit the global spread of antibiotic resistance, the assembly of environmental
metagenomes has the potential to provide rich contextual information (eg, taxonomic hosts …
metagenomes has the potential to provide rich contextual information (eg, taxonomic hosts …
NanoARG: a web service for detecting and contextualizing antimicrobial resistance genes from nanopore-derived metagenomes
Background Direct and indirect selection pressures imposed by antibiotics and co-selective
agents and horizontal gene transfer are fundamental drivers of the evolution and spread of …
agents and horizontal gene transfer are fundamental drivers of the evolution and spread of …