Clinical and translational values of spatial transcriptomics

L Zhang, D Chen, D Song, X Liu, Y Zhang… - … and Targeted Therapy, 2022 - nature.com
The combination of spatial transcriptomics (ST) and single cell RNA sequencing (scRNA-
seq) acts as a pivotal component to bridge the pathological phenomes of human tissues with …

[HTML][HTML] Spatially resolved transcriptomics: a comprehensive review of their technological advances, applications, and challenges

M Cheng, Y Jiang, J Xu, AFA Mentis, S Wang… - Journal of Genetics and …, 2023 - Elsevier
The ability to explore life kingdoms is largely driven by innovations and breakthroughs in
technology, from the invention of the microscope 350 years ago to the recent emergence of …

Spatial and single-cell transcriptomics decipher the cellular environment containing HLA-G+ cancer cells and SPP1+ macrophages in colorectal cancer

Y Ozato, Y Kojima, Y Kobayashi, Y Hisamatsu… - Cell reports, 2023 - cell.com
The cellular interactions in the tumor microenvironment of colorectal cancer (CRC) are
poorly understood, hindering patient treatment. In the current study, we investigate whether …

The role of the haematopoietic stem cell niche in development and ageing

TL Cain, M Derecka… - Nature Reviews Molecular …, 2024 - nature.com
Blood production depends on rare haematopoietic stem cells (HSCs) and haematopoietic
stem and progenitor cells (HSPCs) that ultimately take up residence in the bone marrow …

Approaches for studying human macrophages

Y Bao, G Wang, H Li - Trends in Immunology, 2024 - cell.com
Macrophages are vital tissue components involved in organogenesis, maintaining
homeostasis, and responses to disease. Mouse models have significantly improved our …

Spatial transcriptomics: a powerful tool in disease understanding and drug discovery

J Cao, C Li, Z Cui, S Deng, T Lei, W Liu, H Yang… - …, 2024 - pmc.ncbi.nlm.nih.gov
Recent advancements in modern science have provided robust tools for drug discovery. The
rapid development of transcriptome sequencing technologies has given rise to single-cell …

Identification of phenotypically, functionally, and anatomically distinct stromal niche populations in human bone marrow based on single-cell RNA sequencing

H Li, S Bräunig, P Dhapolar, G Karlsson, S Lang… - elife, 2023 - elifesciences.org
Hematopoiesis is regulated by the bone marrow (BM) stroma. However, cellular identities
and functions of the different BM stromal elements in humans remain poorly defined. Based …

Spatial transcriptomics in development and disease

R Zhou, G Yang, Y Zhang, Y Wang - Molecular Biomedicine, 2023 - Springer
The proper functioning of diverse biological systems depends on the spatial organization of
their cells, a critical factor for biological processes like sha** intricate tissue functions and …

Deregulated protein homeostasis constrains fetal hematopoietic stem cell pool expansion in Fanconi anemia

N Kovuru, M Mochizuki-Kashio, T Menna… - Nature …, 2024 - nature.com
Demand-adjusted and cell type specific rates of protein synthesis represent an important
safeguard for fate and function of long-term hematopoietic stem cells. Here, we identify …

Cell therapy in end-stage liver disease: replace and remodel

XH Hu, L Chen, H Wu, YB Tang, QM Zheng… - Stem Cell Research & …, 2023 - Springer
Liver disease is prevalent worldwide. When it reaches the end stage, mortality rises to 50%
or more. Although liver transplantation has emerged as the most efficient treatment for end …