Conceptual and methodological advances in habitat‐selection modeling: guidelines for ecology and evolution

JM Northrup, E Vander Wal, M Bonar… - Ecological …, 2022 - Wiley Online Library
Habitat selection is a fundamental animal behavior that shapes a wide range of ecological
processes, including animal movement, nutrient transfer, trophic dynamics and population …

[HTML][HTML] An overview of modern applications of negative binomial modelling in ecology and biodiversity

J Stoklosa, RV Blakey, FKC Hui - Diversity, 2022 - mdpi.com
Negative binomial modelling is one of the most commonly used statistical tools for analysing
count data in ecology and biodiversity research. This is not surprising given the prevalence …

Half a century of global decline in oceanic sharks and rays

N Pacoureau, CL Rigby, PM Kyne, RB Sherley… - Nature, 2021 - nature.com
Overfishing is the primary cause of marine defaunation, yet declines in and increasing
extinction risks of individual species are difficult to measure, particularly for the largest …

Catch per unit effort modelling for stock assessment: A summary of good practices

SD Hoyle, RA Campbell, ND Ducharme-Barth… - Fisheries …, 2024 - Elsevier
Indices of abundance based on fishery catch-per-unit-effort (CPUE) are important
components of many stock assessments, particularly when fishery-independent surveys are …

Disturbance type and species life history predict mammal responses to humans

JP Suraci, KM Gaynor, ML Allen… - Global Change …, 2021 - Wiley Online Library
Human activity and land use change impact every landscape on Earth, driving declines in
many animal species while benefiting others. Species ecological and life history traits may …

A guide to state–space modeling of ecological time series

M Auger‐Méthé, K Newman, D Cole… - Ecological …, 2021 - Wiley Online Library
State–space models (SSMs) are an important modeling framework for analyzing ecological
time series. These hierarchical models are commonly used to model population dynamics …

Conducting and interpreting fish telemetry studies: considerations for researchers and resource managers

JW Brownscombe, EJI Lédée, GD Raby… - Reviews in Fish Biology …, 2019 - Springer
Telemetry is an increasingly common tool for studying the ecology of wild fish, with great
potential to provide valuable information for management and conservation. For researchers …

Quantifying 25 years of disease‐caused declines in Tasmanian devil populations: host density drives spatial pathogen spread

CX Cunningham, S Comte, H McCallum… - Ecology …, 2021 - Wiley Online Library
Infectious diseases are strong drivers of wildlife population dynamics, however, empirical
analyses from the early stages of pathogen emergence are rare. Tasmanian devil facial …

mcp: An R package for regression with multiple change points

JK Lindeløv - 2020 - osf.io
The R package mcp does flexible and informed Bayesian regression with change points.
mcp can infer the location of changes between regression models on means, variances …

The use of Bayesian priors in ecology: the good, the bad and the not great

KM Banner, KM Irvine… - Methods in Ecology and …, 2020 - Wiley Online Library
Bayesian data analysis (BDA) is a powerful tool for making inference from ecological data,
but its full potential has yet to be realized. Despite a generally positive trajectory in research …