Using genetic programming to predict and optimize protein function

I Miralavy, AR Bricco, AA Gilad, W Banzhaf - PeerJ physical chemistry, 2022 - peerj.com
Protein engineers conventionally use tools such as Directed Evolution to find new proteins
with better functionalities and traits. More recently, computational techniques and especially …

Prediction of enzymatic function with high efficiency and a reduced number of features using genetic algorithm

DR Reis, BC Santos, L Bleicher, LE Zárate… - Computers in Biology …, 2023 - Elsevier
The post-genomic era has raised a growing demand for efficient procedures to identify
protein functions, which can be accomplished by applying machine learning to the …

A predictive analytics approach in determining the predictors of student attrition in the higher education institutions in the Philippines

MY Orong, RA Caroro, GD Durias, JA Cabrera… - proceedings of the 3rd …, 2020 - dl.acm.org
The paper identified the predictors of student attrition in the Higher Education Institution
(HEI) through predictive analytics approach. The prediction model used in the study includes …

Multi-objective genetic algorithm for feature selection in a protein function prediction context

BC Dos Santos, CN Nobre… - 2018 IEEE Congress on …, 2018 - ieeexplore.ieee.org
With the recent advances of genomic sequencing techniques, the number of protein
sequences available for analysis has increased greatly. Wet-lab processes to predict the …

Algorithms analysis in adjusting the SVM parameters: an approach in the prediction of protein function

MFM Silva, LF Leijoto, CN Nobre - Applied Artificial Intelligence, 2017 - Taylor & Francis
ABSTRACT Support Vector Machine (SVM) is a supervised learning algorithm widely used
in data classification problems. However, the quality of the solution is related to the chosen …

A hybrid prediction model integrating a modified genetic algorithm to k-means segmentation and C4. 5

MY Orong, AM Sison, RP Medina - TENCON 2018-2018 IEEE …, 2018 - ieeexplore.ieee.org
Improving accuracy of a prediction model is an ongoing subject of research in the field of
information technology. Improved efficiency of prediction model helped an organization in …

Selection of a Minimal Number of Significant Porcine SNPs by an Information Gain and Genetic Algorithm Hybrid Model

W Rathasamuth, K Pasupa, S Tongsima - arxiv preprint arxiv:1905.09059, 2019 - arxiv.org
A panel of large number of common Single Nucleotide Polymorphisms (SNPs) distributed
across an entire porcine genome has been widely used to represent genetic variability of …

Evaluating biological characteristics for protein function prediction using support vector machine

GTDO Santos, CN Nobre… - International Journal of …, 2021 - inderscienceonline.com
Predicting protein function is a latent problem and a challenge in the field of Bioinformatics.
Over the years, several computational approaches have been proposed for this purpose …

An improved method to enhance protein structural class prediction using their secondary structure sequences and genetic algorithm

MH Aldulaimi, S Zainudin… - International Journal of …, 2018 - inderscienceonline.com
Many approaches have been proposed to enhance the accuracy of protein structural class.
However, such approaches did not cover the low-similarity sequences which are proved to …

[PDF][PDF] A Novel Approach in Determining the Reasons of Student Attrition based on Enhanced Genetic Algorithm with Cross-Average Crossover Operator

MY Orong, MG Dumoloy, AG Besiohan… - … Journal of Basic and …, 2021 - academia.edu
Prediction helps organizations in their decision-making activities for the improvement of the
different functions, services, and even their income. The C4. 5 algorithm is the most …