[HTML][HTML] Networks beyond pairwise interactions: Structure and dynamics

F Battiston, G Cencetti, I Iacopini, V Latora, M Lucas… - Physics reports, 2020 - Elsevier
The complexity of many biological, social and technological systems stems from the richness
of the interactions among their units. Over the past decades, a variety of complex systems …

Computational neuroscience: Mathematical and statistical perspectives

RE Kass, SI Amari, K Arai, EN Brown… - Annual review of …, 2018 - annualreviews.org
Mathematical and statistical models have played important roles in neuroscience, especially
by describing the electrical activity of neurons recorded individually, or collectively across …

The quality and complexity of pairwise maximum entropy models for large cortical populations

VK Olsen, JR Whitlock, Y Roudi - PLOS Computational Biology, 2024 - journals.plos.org
We investigate the ability of the pairwise maximum entropy (PME) model to describe the
spiking activity of large populations of neurons recorded from the visual, auditory, motor, and …

Action potential-coupled Rho GTPase signaling drives presynaptic plasticity

SD O'Neil, B Rácz, WE Brown, Y Gao, EJ Soderblom… - Elife, 2021 - elifesciences.org
In contrast to their postsynaptic counterparts, the contributions of activity-dependent
cytoskeletal signaling to presynaptic plasticity remain controversial and poorly understood …

Maximum entropy models as a tool for building precise neural controls

C Savin, G Tkačik - Current opinion in neurobiology, 2017 - Elsevier
Neural responses are highly structured, with population activity restricted to a small subset of
the astronomical range of possible activity patterns. Characterizing these statistical …

Probabilistic models for neural populations that naturally capture global coupling and criticality

J Humplik, G Tkačik - PLoS computational biology, 2017 - journals.plos.org
Advances in multi-unit recordings pave the way for statistical modeling of activity patterns in
large neural populations. Recent studies have shown that the summed activity of all neurons …

Functional reducibility of higher-order networks

M Lucas, L Gallo, A Ghavasieh, F Battiston… - arxiv preprint arxiv …, 2024 - arxiv.org
Empirical complex systems are widely assumed to be characterized not only by pairwise
interactions, but also by higher-order (group) interactions that affect collective phenomena …

Uncovering hidden network architecture from spiking activities using an exact statistical input-output relation of neurons

SR Shomali, SN Rasuli, MN Ahmadabadi… - Communications …, 2023 - nature.com
Identifying network architecture from observed neural activities is crucial in neuroscience
studies. A key requirement is knowledge of the statistical input-output relation of single …

Approximate inference for time-varying interactions and macroscopic dynamics of neural populations

C Donner, K Obermayer… - PLoS computational …, 2017 - journals.plos.org
The models in statistical physics such as an Ising model offer a convenient way to
characterize stationary activity of neural populations. Such stationary activity of neurons may …

Clustering of neural activity: A design principle for population codes

MJ Berry, G Tkačik - Frontiers in computational neuroscience, 2020 - frontiersin.org
We propose that correlations among neurons are generically strong enough to organize
neural activity patterns into a discrete set of clusters, which can each be viewed as a …