Metagenomic applications in microbial diversity, bioremediation, pollution monitoring, enzyme and drug discovery. A review

S Datta, KN Rajnish, MS Samuel… - Environmental …, 2020 - Springer
Metagenomics is a technology employed to study genetic material directly isolated from
environmental samples. Metagenomics thus reveals knowledge on microbial communities of …

[HTML][HTML] Recovering metagenome-assembled genomes from shotgun metagenomic sequencing data: Methods, applications, challenges, and opportunities

Y Zhou, M Liu, J Yang - Microbiological Research, 2022 - Elsevier
Reference genomes are essential for analyzing the metabolic and functional potentials of
microbiomes. However, microbial genome resources are limited because most of …

Diversity and functional landscapes in the microbiota of animals in the wild

D Levin, N Raab, Y Pinto, D Rothschild, G Zanir… - Science, 2021 - science.org
Animals in the wild are able to subsist on pathogen-infected and poisonous food and show
immunity to various diseases. These may be due to their microbiota, yet we have a poor …

Development of ruminal and fecal microbiomes are affected by weaning but not weaning strategy in dairy calves

SJ Meale, S Li, P Azevedo, H Derakhshani… - Frontiers in …, 2016 - frontiersin.org
The nature of weaning, considered the most stressful and significant transition experienced
by dairy calves, influences the ability of a calf to adapt to the dramatic dietary shift, and thus …

Construction of effective minimal active microbial consortia for lignocellulose degradation

PE Puentes-Téllez, J Falcao Salles - Microbial ecology, 2018 - Springer
Enriched microbial communities, obtained from environmental samples through selective
processes, can effectively contribute to lignocellulose degradation. Unfortunately, fully …

Probiotic Bacillus amyloliquefaciens C-1 Improves Growth Performance, Stimulates GH/IGF-1, and Regulates the Gut Microbiota of Growth-Retarded Beef Calves

R Du, S Jiao, Y Dai, J An, J Lv, X Yan, J Wang… - Frontiers in …, 2018 - frontiersin.org
Growth retardation of calves is defined as a symptom of impaired growth and development,
probably due to growth hormone disorder as well as natural and environmental factors in …

Transformation of bacterial community structure in rumen liquid anaerobic digestion of rice straw

J Liang, W Zheng, H Zhang, P Zhang, Y Cai… - Environmental …, 2021 - Elsevier
Rumen liquid can effectively degrade lignocellulosic biomass, in which rumen
microorganisms play an important role. In this study, transformation of bacterial community …

Shifts in taxonomic and functional microbial diversity with agriculture: How fragile is the Brazilian Cerrado?

RC Souza, IC Mendes, FB Reis-Junior, FM Carvalho… - Bmc Microbiology, 2016 - Springer
Abstract Background The Cerrado—an edaphic type of savannah—comprises the second
largest biome of the Brazilian territory and is the main area for grain production in the …

Characteristics and Functions of the Rumen Microbial Community of Cattle‐Yak at Different Ages

Y Sha, J Hu, B Shi, R Dingkao, J Wang… - BioMed research …, 2020 - Wiley Online Library
A cattle‐yak, which is a hybrid between a yak (Bos grunniens) and cattle (Bos taurus), is an
important livestock animal, but basic questions regarding its physiology and environmental …

The application of omics in ruminant production: A review in the tropical and sub-tropical animal production context

DM Ribeiro, AAK Salama, ACM Vitor, A Argüello… - Journal of …, 2020 - Elsevier
The demand for animal products (eg dairy and beef) in tropical regions is expected to
increase in parallel with the public demand for sustainable practices, due to factors such as …