Enhancer redundancy in development and disease

EZ Kvon, R Waymack, M Gad, Z Wunderlich - Nature Reviews Genetics, 2021 - nature.com
Shadow enhancers are seemingly redundant transcriptional cis-regulatory elements that
regulate the same gene and drive overlap** expression patterns. Recent studies have …

Topologically associating domains and regulatory landscapes in development, evolution and disease

JJ Tena, JM Santos-Pereira - Frontiers in cell and developmental …, 2021 - frontiersin.org
Animal genomes are folded in topologically associating domains (TADs) that have been
linked to the regulation of the genes they contain by constraining regulatory interactions …

[HTML][HTML] Comprehensive in vivo interrogation reveals phenotypic impact of human enhancer variants

EZ Kvon, Y Zhu, G Kelman, CS Novak, I Plajzer-Frick… - Cell, 2020 - cell.com
Establishing causal links between non-coding variants and human phenotypes is an
increasing challenge. Here, we introduce a high-throughput mouse reporter assay for …

Galeaspid anatomy and the origin of vertebrate paired appendages

Z Gai, Q Li, HG Ferrón, JN Keating, J Wang… - Nature, 2022 - nature.com
Paired fins are a major innovation, that evolved in the jawed vertebrate lineage after
divergence from living jawless vertebrates. Extinct jawless armoured stem gnathostomes …

Hox genes control homocercal caudal fin development and evolution

N Cumplido, G Arratia, T Desvignes… - Science …, 2024 - science.org
Ancient bony fishes had heterocercal tails, like modern sharks and sturgeons, with
asymmetric caudal fins and a vertebral column extending into an elongated upper lobe …

Heterogeneity and molecular markers for CNS glial cells revealed by single-cell transcriptomics

J Sun, Y Song, Z Chen, J Qiu, S Zhu, L Wu… - Cellular and Molecular …, 2021 - Springer
Glial cells, including astrocytes, oligodendrocytes, and microglia, are the major components
in the central nervous system (CNS). Studies have revealed the heterogeneity of each glial …

[HTML][HTML] Ancient developmental genes underlie evolutionary novelties in walking fish

AL Herbert, CAH Allard, MJ McCoy, JI Wucherpfennig… - Current Biology, 2024 - cell.com
A critical question in biology is how new traits evolve, but studying this in wild animals
remains challenging. Here, we probe the genetic basis of trait gain in sea robin fish, which …

The untapped potential of medaka and its wild relatives

L Hilgers, J Schwarzer - Elife, 2019 - elifesciences.org
The medaka is a fish that has served as a model organism for over a century, yet there is still
much to learn about its life in the wild. Here we summarize the current knowledge, highlight …

The neural stem cell secretome across neurodevelopment

TJ Dause, JK Denninger, BM Smith, ED Kirby - Experimental Neurology, 2022 - Elsevier
Neural stem cell (NSC) based therapies are at the forefront of regenerative medicine
strategies to combat illness and injury of the central nervous system (CNS). In addition to …

Housing microbial symbionts: evolutionary origins and diversification of symbiotic organs in animals

AE Douglas - … Transactions of the Royal Society B, 2020 - royalsocietypublishing.org
In many animal hosts, microbial symbionts are housed within specialized structures known
as symbiotic organs, but the evolutionary origins of these structures have rarely been …