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The biofilm life cycle: expanding the conceptual model of biofilm formation
Bacterial biofilms are often defined as communities of surface-attached bacteria and are
typically depicted with a classic mushroom-shaped structure characteristic of Pseudomonas …
typically depicted with a classic mushroom-shaped structure characteristic of Pseudomonas …
Gradients and consequences of heterogeneity in biofilms
Historically, appreciation for the roles of resource gradients in biology has fluctuated
inversely to the popularity of genetic mechanisms. Nevertheless, in microbiology specifically …
inversely to the popularity of genetic mechanisms. Nevertheless, in microbiology specifically …
Microbial community resilience across ecosystems and multiple disturbances
L Philippot, BS Griffiths… - … and Molecular Biology …, 2021 - journals.asm.org
The ability of ecosystems to withstand disturbances and maintain their functions is being
increasingly tested as rates of change intensify due to climate change and other human …
increasingly tested as rates of change intensify due to climate change and other human …
Spatial structure, chemotaxis and quorum sensing shape bacterial biomass accumulation in complex porous media
Biological tissues, sediments, or engineered systems are spatially structured media with a
tortuous and porous structure that host the flow of fluids. Such complex environments can …
tortuous and porous structure that host the flow of fluids. Such complex environments can …
Droplet printing reveals the importance of micron-scale structure for bacterial ecology
Bacteria often live in diverse communities where the spatial arrangement of strains and
species is considered critical for their ecology. However, a test of this hypothesis requires …
species is considered critical for their ecology. However, a test of this hypothesis requires …
Short-range quorum sensing controls horizontal gene transfer at micron scale in bacterial communities
J van Gestel, T Bareia, B Tenennbaum… - Nature …, 2021 - nature.com
In bacterial communities, cells often communicate by the release and detection of small
diffusible molecules, a process termed quorum-sensing. Signal molecules are thought to …
diffusible molecules, a process termed quorum-sensing. Signal molecules are thought to …
Spatial transcriptome uncovers rich coordination of metabolism in E. coli K12 biofilm
Microbial communities often display region-specific properties, which give rise to complex
interactions and emergent behaviors that are critical to the homeostasis and stress response …
interactions and emergent behaviors that are critical to the homeostasis and stress response …
Microfluidics as an emerging platform for exploring soil environmental processes: a critical review
Investigating environmental processes, especially those occurring in soils, calls for
innovative and multidisciplinary technologies that can provide insights at the microscale …
innovative and multidisciplinary technologies that can provide insights at the microscale …
Advances and opportunities in image analysis of bacterial cells and communities
The cellular morphology and sub-cellular spatial structure critically influence the function of
microbial cells. Similarly, the spatial arrangement of genotypes and phenotypes in microbial …
microbial cells. Similarly, the spatial arrangement of genotypes and phenotypes in microbial …
Metabolic heterogeneity and cross-feeding in bacterial multicellular systems
Cells in assemblages differentiate and perform distinct roles. Though many pathways of
differentiation are understood at the molecular level in multicellular eukaryotes, the …
differentiation are understood at the molecular level in multicellular eukaryotes, the …