Nitric oxide-dependent regulation of sweet pepper fruit ripening
Ripening is a complex physiological process that involves changes in reactive nitrogen and
oxygen species that govern the shelf-life and quality of fruits. Nitric oxide (NO)-dependent …
oxygen species that govern the shelf-life and quality of fruits. Nitric oxide (NO)-dependent …
Unleashing the power within short-read RNA-seq for plant research: Beyond differential expression analysis and toward regulomics
M Tu, J Zeng, J Zhang, G Fan, G Song - Frontiers in Plant Science, 2022 - frontiersin.org
RNA-seq has become a state-of-the-art technique for transcriptomic studies. Advances in
both RNA-seq techniques and the corresponding analysis tools and pipelines have …
both RNA-seq techniques and the corresponding analysis tools and pipelines have …
Optimizing an efficient ensemble approach for high-quality de novo transcriptome assembly of Thymus daenensis
Non-erroneous and well-optimized transcriptome assembly is a crucial prerequisite for
authentic downstream analyses. Each de novo assembler has its own algorithm-dependent …
authentic downstream analyses. Each de novo assembler has its own algorithm-dependent …
Superoxide Radical Metabolism in Sweet Pepper (Capsicum annuum L.) Fruits Is Regulated by Ripening and by a NO-Enriched Environment
S González-Gordo, M Rodríguez-Ruiz… - Frontiers in plant …, 2020 - frontiersin.org
Superoxide radical (O2•–) is involved in numerous physiological and stress processes in
higher plants. Fruit ripening encompasses degradative and biosynthetic pathways including …
higher plants. Fruit ripening encompasses degradative and biosynthetic pathways including …
Characterization of leucine aminopeptidase (LAP) activity in sweet pepper fruits during ripening and its inhibition by nitration and reducing events
MA Muñoz-Vargas, J Taboada, S González-Gordo… - Plant Cell Reports, 2024 - Springer
Key message Pepper fruits contain two leucine aminopeptidase (LAP) genes which are
differentially modulated during ripening and by nitric oxide. The LAP activity increases …
differentially modulated during ripening and by nitric oxide. The LAP activity increases …
The haustorial transcriptome of the cucurbit pathogen Podosphaera xanthii reveals new insights into the biotrophy and pathogenesis of powdery mildew fungi
Background Podosphaera xanthii is the main causal agent of powdery mildew disease in
cucurbits and is responsible for important yield losses in these crops worldwide. Powdery …
cucurbits and is responsible for important yield losses in these crops worldwide. Powdery …
Normalized Workflow to Optimize Hybrid De Novo Transcriptome Assembly for Non-Model Species: A Case Study in Lilium ledebourii (Baker) Boiss
A high-quality transcriptome is required to advance numerous bioinformatics workflows.
Nevertheless, the effectuality of tools for de novo assembly and real precision assembled …
Nevertheless, the effectuality of tools for de novo assembly and real precision assembled …
Raw transcriptomics data to gene specific SSRs: a validated free bioinformatics workflow for biologists
Recent advances in next-generation sequencing technologies have paved the path for a
considerable amount of sequencing data at a relatively low cost. This has revolutionized the …
considerable amount of sequencing data at a relatively low cost. This has revolutionized the …
An improved de novo assembling and polishing of Solea senegalensis transcriptome shed light on retinoic acid signalling in larvae
Senegalese sole is an economically important flatfish species in aquaculture and an
attractive model to decipher the molecular mechanisms governing the severe …
attractive model to decipher the molecular mechanisms governing the severe …
Gene Mining for Conserved, Non-Annotated Proteins of Podosphaera xanthii Identifies Novel Target Candidates for Controlling Powdery Mildews by Spray-Induced …
The powdery mildew fungus Podosphaera xanthii is one of the most important limiting
factors for cucurbit production worldwide. Despite the significant efforts made by breeding …
factors for cucurbit production worldwide. Despite the significant efforts made by breeding …