Protein analysis by shotgun/bottom-up proteomics
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
Trapped ion mobility spectrometry and parallel accumulation–serial fragmentation in proteomics
Recent advances in efficiency and ease of implementation have rekindled interest in ion
mobility spectrometry, a technique that separates gas phase ions by their size and shape …
mobility spectrometry, a technique that separates gas phase ions by their size and shape …
Online parallel accumulation–serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer
In bottom-up proteomics, peptides are separated by liquid chromatography with elution peak
widths in the range of seconds, whereas mass spectra are acquired in about 100 …
widths in the range of seconds, whereas mass spectra are acquired in about 100 …
Drift time-specific collision energies enable deep-coverage data-independent acquisition proteomics
We present a data-independent acquisition mass spectrometry method, ultradefinition (UD)
MSE. This approach utilizes ion mobility drift time-specific collision-energy profiles to …
MSE. This approach utilizes ion mobility drift time-specific collision-energy profiles to …
Label-free quantification in ion mobility–enhanced data-independent acquisition proteomics
Unbiased data-independent acquisition (DIA) strategies have gained increased popularity in
the field of quantitative proteomics. The integration of ion mobility separation (IMS) into DIA …
the field of quantitative proteomics. The integration of ion mobility separation (IMS) into DIA …
Mass spectrometry-based proteomics: existing capabilities and future directions
Mass spectrometry (MS)-based proteomics is emerging as a broadly effective means for
identification, characterization, and quantification of proteins that are integral components of …
identification, characterization, and quantification of proteins that are integral components of …
High-throughput proteomics
Mass spectrometry (MS)–based high-throughput proteomics is the core technique for large-
scale protein characterization. Due to the extreme complexity of proteomes, sophisticated …
scale protein characterization. Due to the extreme complexity of proteomes, sophisticated …
Recent developments in liquid chromatography–mass spectrometry and related techniques
M Holčapek, R Jirásko, M Lísa - Journal of Chromatography A, 2012 - Elsevier
This review summarizes the state-of-art in liquid chromatography–mass spectrometry (LC–
MS) and related techniques with the main focus on recent developments in the last decade …
MS) and related techniques with the main focus on recent developments in the last decade …
Ion mobility mass spectrometry of peptide ions: effects of drift gas and calibration strategies
One difficulty in using ion mobility (IM) mass spectrometry (MS) to improve the specificity of
peptide ion assignments is that IM separations are performed using a range of pressures …
peptide ion assignments is that IM separations are performed using a range of pressures …
MaxQuant software for ion mobility enhanced shotgun proteomics
N Prianichnikov, H Koch, S Koch, M Lubeck… - Molecular & Cellular …, 2020 - ASBMB
Ion mobility can add a dimension to LC-MS based shotgun proteomics which has the
potential to boost proteome coverage, quantification accuracy and dynamic range. Required …
potential to boost proteome coverage, quantification accuracy and dynamic range. Required …