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Applications of environmental DNA (eDNA) in ecology and conservation: opportunities, challenges and prospects
KC Beng, RT Corlett - Biodiversity and conservation, 2020 - Springer
Conserving biodiversity in the face of ever-increasing human pressure is hampered by our
lack of basic information on species occurrence, distribution, abundance, habitat …
lack of basic information on species occurrence, distribution, abundance, habitat …
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
The genomic revolution has fundamentally changed how we survey biodiversity on earth.
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
High‐throughput sequencing (“HTS”) platforms now enable the rapid sequencing of DNA …
Deep learning and computer vision will transform entomology
Most animal species on Earth are insects, and recent reports suggest that their abundance is
in drastic decline. Although these reports come from a wide range of insect taxa and regions …
in drastic decline. Although these reports come from a wide range of insect taxa and regions …
Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?
Advances in DNA sequencing technology have revolutionized the field of molecular analysis
of trophic interactions, and it is now possible to recover counts of food DNA sequences from …
of trophic interactions, and it is now possible to recover counts of food DNA sequences from …
ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone
Background DNA barcodes are a useful tool for discovering, understanding, and monitoring
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …
[HTML][HTML] The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems
The bioassessment of aquatic ecosystems is currently based on various biotic indices that
use the occurrence and/or abundance of selected taxonomic groups to define ecological …
use the occurrence and/or abundance of selected taxonomic groups to define ecological …
Cryptic species as a window into the paradigm shift of the species concept
C Fišer, CT Robinson, F Malard - Molecular ecology, 2018 - Wiley Online Library
The species concept is the cornerstone of biodiversity science, and any paradigm shift in the
delimitation of species affects many research fields. Many biologists now are embracing a …
delimitation of species affects many research fields. Many biologists now are embracing a …
How quantitative is metabarcoding: A meta‐analytical approach
Metabarcoding has been used in a range of ecological applications such as taxonomic
assignment, dietary analysis and the analysis of environmental DNA. However, after a …
assignment, dietary analysis and the analysis of environmental DNA. However, after a …
Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
Effective marine management requires comprehensive data on the status of marine
biodiversity. However, efficient methods that can document biodiversity in our oceans are …
biodiversity. However, efficient methods that can document biodiversity in our oceans are …
Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive
Assessment of ecological status for the European Water Framework Directive (WFD) is
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …
based on “Biological Quality Elements”(BQEs), namely phytoplankton, benthic flora, benthic …