Global diversity and inferred ecophysiology of microorganisms with the potential for dissimilatory sulfate/sulfite reduction
Sulfate/sulfite-reducing microorganisms (SRM) are ubiquitous in nature, driving the global
sulfur cycle. A hallmark of SRM is the dissimilatory sulfite reductase encoded by the genes …
sulfur cycle. A hallmark of SRM is the dissimilatory sulfite reductase encoded by the genes …
TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes
JP Meier-Kolthoff, JS Carbasse… - Nucleic acids …, 2022 - academic.oup.com
Microbial systematics is heavily influenced by genome-based methods and challenged by
an ever increasing number of taxon names and associated sequences in public data …
an ever increasing number of taxon names and associated sequences in public data …
Valid publication of the names of forty-two phyla of prokaryotes
After the International Committee on Systematics of Prokaryotes (ICSP) had voted to include
the rank of phylum in the rules of the International Code of Nomenclature of Prokaryotes …
the rank of phylum in the rules of the International Code of Nomenclature of Prokaryotes …
GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy
Abstract The Genome Taxonomy Database (GTDB; https://gtdb. ecogenomic. org) provides a
phylogenetically consistent and rank normalized genome-based taxonomy for prokaryotic …
phylogenetically consistent and rank normalized genome-based taxonomy for prokaryotic …
Microbial taxonomy run amok
DNA sequencing has led to an explosion in discovery of microbial phylogenetic novelty,
especially that represented by uncultivated taxa, to which the traditional system of …
especially that represented by uncultivated taxa, to which the traditional system of …
Globally distributed Myxococcota with photosynthesis gene clusters illuminate the origin and evolution of a potentially chimeric lifestyle
Photosynthesis is a fundamental biogeochemical process, thought to be restricted to a few
bacterial and eukaryotic phyla. However, understanding the origin and evolution of …
bacterial and eukaryotic phyla. However, understanding the origin and evolution of …
PET microplastics affect human gut microbiota communities during simulated gastrointestinal digestion, first evidence of plausible polymer biodegradation during …
A Tamargo, N Molinero, JJ Reinosa… - Scientific Reports, 2022 - nature.com
Microplastics (MPs) are a widely recognized global problem due to their prevalence in
natural environments and the food chain. However, the impact of microplastics on human …
natural environments and the food chain. However, the impact of microplastics on human …
Large-scale protein level comparison of Deltaproteobacteria reveals cohesive metabolic groups
Deltaproteobacteria, now proposed to be the phyla Desulfobacterota, Myxococcota, and
SAR324, are ubiquitous in marine environments and play essential roles in global carbon …
SAR324, are ubiquitous in marine environments and play essential roles in global carbon …
Active predation, phylogenetic diversity, and global prevalence of myxobacteria in wastewater treatment plants
The operation of modern wastewater treatment plants (WWTPs) is driven by activated sludge
microbiota, a complex assemblage of trophically interacting microorganisms. Microbial …
microbiota, a complex assemblage of trophically interacting microorganisms. Microbial …
MiST 4.0: a new release of the microbial signal transduction database, now with a metagenomic component
Signal transduction systems in bacteria and archaea link environmental stimuli to specific
adaptive cellular responses. They control gene expression, motility, biofilm formation …
adaptive cellular responses. They control gene expression, motility, biofilm formation …