International Union of Basic and Clinical Pharmacology. LXXXIX. Update on the extended family of chemokine receptors and introducing a new nomenclature for …

F Bachelerie, A Ben-Baruch, AM Burkhardt… - Pharmacological …, 2014 - Elsevier
Sixteen years ago, the Nomenclature Committee of the International Union of Pharmacology
approved a system for naming human seven-transmembrane (7TM) G protein-coupled …

The Connectivity Map: a new tool for biomedical research

J Lamb - Nature reviews cancer, 2007 - nature.com
The ultimate objective of biomedical research is to connect human diseases with the genes
that underlie them and drugs that treat them. But this remains a daunting task, and even the …

The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins

AD Rouillard, GW Gundersen, NF Fernandez… - Database, 2016 - academic.oup.com
Genomics, epigenomics, transcriptomics, proteomics and metabolomics efforts rapidly
generate a plethora of data on the activity and levels of biomolecules within mammalian …

PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

VK Mootha, CM Lindgren, KF Eriksson… - Nature …, 2003 - nature.com
DNA microarrays can be used to identify gene expression changes characteristic of human
disease. This is challenging, however, when relevant differences are subtle at the level of …

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

M Guttman, I Amit, M Garber, C French, MF Lin… - Nature, 2009 - nature.com
There is growing recognition that mammalian cells produce many thousands of large
intergenic transcripts,,,. However, the functional significance of these transcripts has been …

A gene atlas of the mouse and human protein-encoding transcriptomes

AI Su, T Wiltshire, S Batalov, H Lapp… - Proceedings of the …, 2004 - National Acad Sciences
The tissue-specific pattern of mRNA expression can indicate important clues about gene
function. High-density oligonucleotide arrays offer the opportunity to examine patterns of …

Identification of mammalian microRNA host genes and transcription units

A Rodriguez, S Griffiths-Jones, JL Ashurst… - Genome …, 2004 - genome.cshlp.org
To derive a global perspective on the transcription of microRNAs (miRNAs) in mammals, we
annotated the genomic position and context of this class of noncoding RNAs (ncRNAs) in …

[HTML][HTML] Coordinated transcription of key pathways in the mouse by the circadian clock

S Panda, MP Antoch, BH Miller, AI Su, AB Schook… - Cell, 2002 - cell.com
In mammals, circadian control of physiology and behavior is driven by a master pacemaker
located in the suprachiasmatic nuclei (SCN) of the hypothalamus. We have used gene …

Consensus clustering: a resampling-based method for class discovery and visualization of gene expression microarray data

S Monti, P Tamayo, J Mesirov, T Golub - Machine learning, 2003 - Springer
In this paper we present a new methodology of class discovery and clustering validation
tailored to the task of analyzing gene expression data. The method can best be thought of as …

The genetic landscape of high-risk neuroblastoma

TJ Pugh, O Morozova, EF Attiyeh, S Asgharzadeh… - Nature …, 2013 - nature.com
Neuroblastoma is a malignancy of the develo** sympathetic nervous system that often
presents with widespread metastatic disease, resulting in survival rates of less than 50%. To …