[HTML][HTML] Deep generative models for 3D molecular structure

B Baillif, J Cole, P McCabe, A Bender - Current Opinion in Structural …, 2023 - Elsevier
Deep generative models have gained recent popularity for chemical design. Many of these
models have historically operated in 2D space; however, more recently explicit 3D …

Inverse design of 3d molecular structures with conditional generative neural networks

NWA Gebauer, M Gastegger, SSP Hessmann… - Nature …, 2022 - nature.com
The rational design of molecules with desired properties is a long-standing challenge in
chemistry. Generative neural networks have emerged as a powerful approach to sample …

Artificial intelligence in molecular de novo design: Integration with experiment

JP Janet, L Mervin, O Engkvist - Current Opinion in Structural Biology, 2023 - Elsevier
In this mini review, we capture the latest progress of applying artificial intelligence (AI)
techniques based on deep learning architectures to molecular de novo design with a focus …

Assessing deep generative models in chemical composition space

H Türk, E Landini, C Kunkel, JT Margraf… - Chemistry of …, 2022 - ACS Publications
The computational discovery of novel materials has been one of the main motivations
behind research in theoretical chemistry for several decades. Despite much effort, this is far …

Top-n: Equivariant set and graph generation without exchangeability

C Vignac, P Frossard - arxiv preprint arxiv:2110.02096, 2021 - arxiv.org
This work addresses one-shot set and graph generation, and, more specifically, the
parametrization of probabilistic decoders that map a vector-shaped prior to a distribution …

ChemistGA: a chemical synthesizable accessible molecular generation algorithm for real-world drug discovery

J Wang, X Wang, H Sun, M Wang, Y Zeng… - Journal of Medicinal …, 2022 - ACS Publications
Many deep learning (DL)-based molecular generative models have been proposed to
design novel molecules. These models may perform well on benchmarks, but they usually …

Deep reinforcement learning in chemistry: A review

B Sridharan, A Sinha, J Bardhan… - Journal of …, 2024 - Wiley Online Library
Reinforcement learning (RL) has been applied to various domains in computational
chemistry and has found wide‐spread success. In this review, we first motivate the …

A review of reinforcement learning in chemistry

S Gow, M Niranjan, S Kanza, JG Frey - Digital Discovery, 2022 - pubs.rsc.org
The growth of machine learning as a tool for research in computational chemistry is well
documented. For many years, this growth was heavily driven by the paradigms of supervised …

[HTML][HTML] Ab initio machine learning of phase space averages

J Weinreich, D Lemm, GF von Rudorff… - The Journal of …, 2022 - pubs.aip.org
Equilibrium structures determine material properties and biochemical functions. We here
propose to machine learn phase space averages, conventionally obtained by ab initio or …

Reinforcement learning for in silico determination of adsorbate—substrate structures

MP Lourenço, J Hostaš, C Bellinger… - Journal of …, 2024 - Wiley Online Library
Reinforcement learning (RL) methods have helped to define the state of the art in the field of
modern artificial intelligence, mostly after the breakthrough involving AlphaGo and the …