Genome structural variation discovery and genoty**

C Alkan, BP Coe, EE Eichler - Nature reviews genetics, 2011 - nature.com
Comparisons of human genomes show that more base pairs are altered as a result of
structural variation—including copy number variation—than as a result of point mutations …

Microbial genome-wide association studies: lessons from human GWAS

RA Power, J Parkhill, T De Oliveira - Nature reviews genetics, 2017 - nature.com
The reduced costs of sequencing have led to whole-genome sequences for a large number
of microorganisms, enabling the application of microbial genome-wide association studies …

Pre-clinical study of induced pluripotent stem cell-derived dopaminergic progenitor cells for Parkinson's disease

D Doi, H Magotani, T Kikuchi, M Ikeda… - Nature …, 2020 - nature.com
Induced pluripotent stem cell (iPSC)-derived dopaminergic (DA) neurons are an expected
source for cell-based therapies for Parkinson's disease (PD). The regulatory criteria for the …

PAX5-driven subtypes of B-progenitor acute lymphoblastic leukemia

Z Gu, ML Churchman, KG Roberts, I Moore, X Zhou… - Nature …, 2019 - nature.com
Recent genomic studies have identified chromosomal rearrangements defining new
subtypes of B-progenitor acute lymphoblastic leukemia (B-ALL), however many cases lack a …

Pervasive chromosomal instability and karyotype order in tumour evolution

TBK Watkins, EL Lim, M Petkovic, S Elizalde… - Nature, 2020 - nature.com
Chromosomal instability in cancer consists of dynamic changes to the number and structure
of chromosomes,. The resulting diversity in somatic copy number alterations (SCNAs) may …

[HTML][HTML] Pan-cancer immunogenomic analyses reveal genotype-immunophenotype relationships and predictors of response to checkpoint blockade

P Charoentong, F Finotello, M Angelova, C Mayer… - Cell reports, 2017 - cell.com
Summary The Cancer Genome Atlas revealed the genomic landscapes of human cancers.
In parallel, immunotherapy is transforming the treatment of advanced cancers. Unfortunately …

Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects

CR Marshall, DP Howrigan, D Merico… - Nature …, 2017 - nature.com
Copy number variants (CNVs) have been strongly implicated in the genetic etiology of
schizophrenia (SCZ). However, genome-wide investigation of the contribution of CNV to risk …

Human pluripotent stem cells recurrently acquire and expand dominant negative P53 mutations

FT Merkle, S Ghosh, N Kamitaki, J Mitchell, Y Avior… - Nature, 2017 - nature.com
Human pluripotent stem cells (hPS cells) can self-renew indefinitely, making them an
attractive source for regenerative therapies. This expansion potential has been linked with …

The genetic basis and cell of origin of mixed phenotype acute leukaemia

TB Alexander, Z Gu, I Iacobucci, K Dickerson, JK Choi… - Nature, 2018 - nature.com
Mixed phenotype acute leukaemia (MPAL) is a high-risk subtype of leukaemia with myeloid
and lymphoid features, limited genetic characterization, and a lack of consensus regarding …

[HTML][HTML] Parkinson's disease-linked parkin mutation disrupts recycling of synaptic vesicles in human dopaminergic neurons

P Song, W Peng, V Sauve, R Fakih, Z **e, D Ysselstein… - Neuron, 2023 - cell.com
Parkin-mediated mitophagy has been studied extensively, but whether mutations in parkin
contribute to Parkinson's disease pathogenesis through alternative mechanisms remains …