Protein ensembles: how does nature harness thermodynamic fluctuations for life? The diverse functional roles of conformational ensembles in the cell

G Wei, W **, R Nussinov, B Ma - Chemical reviews, 2016 - ACS Publications
All soluble proteins populate conformational ensembles that together constitute the native
state. Their fluctuations in water are intrinsic thermodynamic phenomena, and the …

Bacterial GCN5-Related N-Acetyltransferases: From Resistance to Regulation

L Favrot, JS Blanchard, O Vergnolle - Biochemistry, 2016 - ACS Publications
The GCN5-related N-acetyltransferases family (GNAT) is an important family of proteins that
includes more than 100000 members among eukaryotes and prokaryotes. Acetylation …

Hypothetical protein Rv3423.1 of Mycobacterium tuberculosis is a histone acetyltransferase

L Jose, R Ramachandran, R Bhagavat… - The FEBS …, 2016 - Wiley Online Library
We isolated an 8 kDa mycobacterial hypothetical protein, Rv3423. 1, from the chromatin of
human macrophages infected with Mycobacterium tuberculosis H37Rv. Bioinformatics …

Post-translational lysine ac (et) ylation in bacteria: A biochemical, structural, and synthetic biological perspective

M Lammers - Frontiers in Microbiology, 2021 - frontiersin.org
Ac (et) ylation is a post-translational modification present in all domains of life. First identified
in mammals in histones to regulate RNA synthesis, today it is known that is regulates …

A universal stress protein (USP) in mycobacteria binds cAMP

A Banerjee, RS Adolph, J Gopalakrishnapai… - Journal of Biological …, 2015 - ASBMB
Mycobacteria are endowed with rich and diverse machinery for the synthesis, utilization, and
degradation of cAMP. The actions of cyclic nucleotides are generally mediated by binding of …

Systematic analysis of mycobacterial acylation reveals first example of acylation-mediated regulation of enzyme activity of a bacterial phosphatase

A Singhal, G Arora, R Virmani, P Kundu… - Journal of Biological …, 2015 - ASBMB
Protein lysine acetylation is known to regulate multiple aspects of bacterial metabolism.
However, its presence in mycobacterial signal transduction and virulence-associated …

Insect Arylalkylamine N-Acyltransferases: Mechanism and Role in Fatty Acid Amide Biosynthesis

BG O'Flynn, G Suarez, AJ Hawley… - Frontiers in Molecular …, 2018 - frontiersin.org
Arylalkylamine N-acyltransferases (AANATs) catalyze the formation of an N-acylamide from
an acyl-CoA thioester and an amine. One well known example is the production of N …

Listeriolysin O Affects the Permeability of Caco-2 Monolayer in a Pore-Dependent and Ca2+-Independent Manner

MM Cajnko, M Marušić, M Kisovec, N Rojko… - PLoS …, 2015 - journals.plos.org
Listeria monocytogenes is a food and soil-borne pathogen that secretes a pore-forming toxin
listeriolysin O (LLO) as its major virulence factor. We tested the effects of LLO on an …

Acetylation of response regulator proteins, TcrX and MtrA in M. tuberculosis tunes their phosphotransfer ability and modulates two-component signaling crosstalk

KK Singh, N Bhardwaj, GD Sankhe… - Journal of molecular …, 2019 - Elsevier
Two-component signal transduction (TCS) cascades involve stimulus-dependent activation
and phosphorylation of a sensor kinase (SK), which then transfers the phosphoryl moiety to …

A universal stress protein in Mycobacterium smegmatis sequesters the cAMP-regulated lysine acyltransferase and is essential for biofilm formation

S Samanta, P Biswas, A Banerjee, A Bose… - Journal of Biological …, 2020 - ASBMB
Universal stress proteins (USPs) are present in many bacteria, and their expression is
enhanced under various environmental stresses. We have previously identified a USP in …