Clinicalagent: Clinical trial multi-agent system with large language model-based reasoning

L Yue, S **ng, J Chen, T Fu - Proceedings of the 15th ACM International …, 2024 - dl.acm.org
Large Language Models (LLMs) and multi-agent systems have shown impressive
capabilities in natural language tasks but face challenges in clinical trial applications …

Protein-Mamba: Biological Mamba Models for Protein Function Prediction

B Xu, Y Lu, Y Inoue, N Lee, T Fu, J Chen - arxiv preprint arxiv:2409.14617, 2024 - arxiv.org
Protein function prediction is a pivotal task in drug discovery, significantly impacting the
development of effective and safe therapeutics. Traditional machine learning models often …

DeepProtein: Deep Learning Library and Benchmark for Protein Sequence Learning

J **e, Y Zhao, T Fu - arxiv preprint arxiv:2410.02023, 2024 - arxiv.org
In recent years, deep learning has revolutionized the field of protein science, enabling
advancements in predicting protein properties, structural folding and interactions. This paper …

Mamba-Based Graph Convolutional Networks: Tackling Over-smoothing with Selective State Space

X He, Y Wang, W Fan, X Shen, X Juan, R Miao… - arxiv preprint arxiv …, 2025 - arxiv.org
Graph Neural Networks (GNNs) have shown great success in various graph-based learning
tasks. However, it often faces the issue of over-smoothing as the model depth increases …

Accelerated Markov Chain Monte Carlo Using Adaptive Weighting Scheme

Y Wang, W Chen, S Shan - arxiv preprint arxiv:2408.12888, 2024 - arxiv.org
Gibbs sampling is one of the most commonly used Markov Chain Monte Carlo (MCMC)
algorithms due to its simplicity and efficiency. It cycles through the latent variables, sampling …