In vitro selection of functional nucleic acids
DS Wilson, JW Szostak - Annual review of biochemistry, 1999 - annualreviews.org
▪ Abstract In vitro selection allows rare functional RNA or DNA molecules to be isolated from
pools of over 1015 different sequences. This approach has been used to identify RNA and …
pools of over 1015 different sequences. This approach has been used to identify RNA and …
Influence of RNA secondary structure on the pre-mRNA splicing process
Pre-mRNA splicing in eukaryotes requires joining together the nucleotides of the various
mRNA-coding regions (exons) after recognizing them from the normally vastly superior …
mRNA-coding regions (exons) after recognizing them from the normally vastly superior …
ViennaRNA Package 2.0
Background Secondary structure forms an important intermediate level of description of
nucleic acids that encapsulates the dominating part of the folding energy, is often well …
nucleic acids that encapsulates the dominating part of the folding energy, is often well …
[PDF][PDF] Fast folding and comparison of RNA secondary structures
Computer codes for computation and comparison of RNA secondary structures, the Vienna
RNA paCKage, are presented, that are based on dynamic programming algorithms and aim …
RNA paCKage, are presented, that are based on dynamic programming algorithms and aim …
From sequences to shapes and back: a case study in RNA secondary structures
RNA folding is viewed here as a map assigning secondary structures to sequences. At fixed
chain length the number of sequences far exceeds the number of structures. Frequencies of …
chain length the number of sequences far exceeds the number of structures. Frequencies of …
Complete suboptimal folding of RNA and the stability of secondary structures
An algorithm is presented for generating rigorously all suboptimal secondary structures
between the minimum free energy and an arbitrary upper limit. The algorithm is particularly …
between the minimum free energy and an arbitrary upper limit. The algorithm is particularly …
Plasticity, evolvability, and modularity in RNA
RNA folding from sequences into secondary structures is a simple yet powerful,
biophysically grounded model of a genotype–phenotype map in which concepts like …
biophysically grounded model of a genotype–phenotype map in which concepts like …
Innovation and robustness in complex regulatory gene networks
The history of life involves countless evolutionary innovations, a steady stream of ingenuity
that has been flowing for more than 3 billion years. Very little is known about the principles of …
that has been flowing for more than 3 billion years. Very little is known about the principles of …
Perspective: a critique of Sewall Wright's shifting balance theory of evolution
We evaluate Sewall Wright's three‐phase “shifting balance” theory of evolution, examining
both the theoretical issues and the relevant data from nature and the laboratory. We …
both the theoretical issues and the relevant data from nature and the laboratory. We …
Single-nucleotide polymorphisms can cause different structural folds of mRNA
LX Shen, JP Basilion… - Proceedings of the …, 1999 - National Acad Sciences
Single-nucleotide polymorphisms (SNPs) are the most common type of genetic variation in
man. Genes containing one or more SNPs can give rise to two or more allelic forms of …
man. Genes containing one or more SNPs can give rise to two or more allelic forms of …