[HTML][HTML] Aquatic environmental DNA: A review of the macro-organismal biomonitoring revolution

M Takahashi, M Saccò, JH Kestel, G Nester… - Science of the Total …, 2023 - Elsevier
Environmental DNA (eDNA) is the fastest growing biomonitoring tool fuelled by two key
features: time efficiency and sensitivity. Technological advancements allow rapid …

MitoFish, MitoAnnotator, and MiFish pipeline: updates in 10 years

T Zhu, Y Sato, T Sado, M Miya… - Molecular Biology and …, 2023 - academic.oup.com
Abstract MitoFish, MitoAnnotator, and MiFish Pipeline are comprehensive databases of fish
mitochondrial genomes (mitogenomes), accurate annotation software of fish mitogenomes …

Environmental DNA and RNA in aquatic community ecology: Toward methodological standardization

IV Bunholi, NR Foster, JM Casey - Environmental DNA, 2023 - Wiley Online Library
Molecular technologies have facilitated the expansion of biodiversity assessments across a
broad range of organisms and aquatic systems. Environmental DNA (eDNA) and …

Sustainable management and improvement of genetic resources for aquaculture

AK Sonesson, E Hallerman… - Journal of the World …, 2023 - Wiley Online Library
Effective genetic management of the~ 700 aquatic species cultured globally should be
addressed for aquaculture to make a significant contribution towards meeting the UN's …

Evaluating five primer pairs for environmental DNA metabarcoding of Central European fish species based on mock communities

TH Macher, R Schütz, A Yildiz… - Metabarcoding and …, 2023 - avesis.ankara.edu.tr
Environmental DNA (eDNA) metabarcoding has become a powerful tool for examining fish
communities. Prior to the introduction of eDNA-based assessments into regulatory …

[HTML][HTML] Species-level monitoring of rare and invasive fishes using eDNA metabarcoding in the middle and upper Yarlung Zangbo River, Tibet

X Feng, B Li, Y Chen, R Zhu, Y Jia, X Sui - Water Biology and Security, 2023 - Elsevier
Fish diversity of the Yarlung Zangbo River is very sensitive and vulnerable to biological
invasion, anthropogenic activities and climate change, especially in the upper and middle …

[HTML][HTML] Towards eDNA informed biodiversity studies–Comparing water derived molecular taxa with traditional survey methods

JI Westgaard, K Præbel, P Arneberg, BP Ulaski… - Progress in …, 2024 - Elsevier
Managing natural resources in a sustainable manner requires understanding the complexity
of ecosystems and the species that are associated with the different parts of the ecosystem …

Vertical and horizontal environmental DNA (eDNA) patterns of fish in a shallow and well-mixed North Sea area

N Dukan, I Cornelis, S Maes, K Hostens… - Scientific Reports, 2024 - nature.com
The integration of eDNA metabarcoding into monitoring programs provides valuable
information about fish community structures. Despite the growing body of evidence …

[PDF][PDF] Maximizing the reliability and the number of species assignments in metabarcoding studies using a curated regional library and a public repository

A Bourret, C Nozères, E Parent… - Metabarcoding and …, 2023 - mbmg.pensoft.net
Biodiversity assessments relying on DNA have increased rapidly over the last decade.
However, the reliability of taxonomic assignments in metabarcoding studies is variable and …

eDNA-based diversity and multitrophic network reveal the effects of land use and pollutants on the subtropical Dongjiang River systems

S Qin, F Li, Y Zou, J Xue, Y Zhang, Z Yang - Environmental Pollution, 2023 - Elsevier
Biodiversity and its constituted multitrophic network in rivers are accelerating change under
human land use and pollutants. However, due to the lack of complete datasets across taxa …