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Amyloid β protein and Alzheimer's disease: When computer simulations complement experimental studies
Alzheimer's disease (AD) challenges our society with an annual estimated cost of $1.08
trillion in the United States alone by 2050. 1 AD is a progressive irreversible neurological …
trillion in the United States alone by 2050. 1 AD is a progressive irreversible neurological …
Simulation studies of amyloidogenic polypeptides and their aggregates
Amyloids, fibrillar assembly of (poly) peptide chains, are associated with neurodegenerative
illnesses such as Alzheimer's and Parkinson's diseases, for which there are no cures. The …
illnesses such as Alzheimer's and Parkinson's diseases, for which there are no cures. The …
Biochemistry of amyloid β-protein and amyloid deposits in Alzheimer disease
Progressive cerebral deposition of the amyloid β-protein (Aβ) in brain regions serving
memory and cognition is an invariant and defining feature of Alzheimer disease. A highly …
memory and cognition is an invariant and defining feature of Alzheimer disease. A highly …
Structures of the intrinsically disordered Aβ, tau and α-synuclein proteins in aqueous solution from computer simulations
PH Nguyen, P Derreumaux - Biophysical Chemistry, 2020 - Elsevier
Intrinsically disordered proteins (IDPs) play many biological roles in the human proteome
ranging from vesicular transport, signal transduction to neurodegenerative diseases. The Aβ …
ranging from vesicular transport, signal transduction to neurodegenerative diseases. The Aβ …
Polymorphism in Alzheimer Aβ amyloid organization reflects conformational selection in a rugged energy landscape
Amyloids can have normal biological functions. 1r3 However, amyloidogenic proteins can
also form unwanted oligomeric or polymeric aggregates when disturbed from their native …
also form unwanted oligomeric or polymeric aggregates when disturbed from their native …
Effects of All-Atom Molecular Mechanics Force Fields on Amyloid Peptide Assembly: The Case of Aβ16–22 Dimer
We investigated the effects of 17 widely used atomistic molecular mechanics force fields
(MMFFs) on the structures and kinetics of amyloid peptide assembly. To this end, we …
(MMFFs) on the structures and kinetics of amyloid peptide assembly. To this end, we …
High-resolution structures of the amyloid-β 1–42 dimers from the comparison of four atomistic force fields
VH Man, PH Nguyen… - The Journal of Physical …, 2017 - ACS Publications
The dimer of the amyloid-β peptide Aβ of 42 residues is the smallest toxic species in
Alzheimer's disease, but its equilibrium structures are unknown. Here we determined the …
Alzheimer's disease, but its equilibrium structures are unknown. Here we determined the …
Comparison of force fields for Alzheimer's A: A case study for intrinsically disordered proteins
Intrinsically disordered proteins are essential for biological processes such as cell
signalling, but are also associated to devastating diseases including Alzheimer's disease …
signalling, but are also associated to devastating diseases including Alzheimer's disease …
The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems
The OPEP coarse-grained protein model has been applied to a wide range of applications
since its first release 15 years ago. The model, which combines energetic and structural …
since its first release 15 years ago. The model, which combines energetic and structural …
[HTML][HTML] The role of water in the primary nucleation of protein amyloid aggregation
JD Camino, P Gracia, N Cremades - Biophysical Chemistry, 2021 - Elsevier
The understanding of the complex conformational landscape of amyloid aggregation and its
modulation by relevant physicochemical and cellular factors is a prerequisite for elucidating …
modulation by relevant physicochemical and cellular factors is a prerequisite for elucidating …