[HTML][HTML] The self-organizing genome: principles of genome architecture and function

T Misteli - Cell, 2020 - cell.com
Genomes have complex three-dimensional architectures. The recent convergence of
genetic, biochemical, biophysical, and cell biological methods has uncovered several …

Quantitative phase imaging: recent advances and expanding potential in biomedicine

TL Nguyen, S Pradeep, RL Judson-Torres, J Reed… - ACS …, 2022 - ACS Publications
Quantitative phase imaging (QPI) is a label-free, wide-field microscopy approach with
significant opportunities for biomedical applications. QPI uses the natural phase shift of light …

Integrated spatial genomics reveals global architecture of single nuclei

Y Takei, J Yun, S Zheng, N Ollikainen, N Pierson… - Nature, 2021 - nature.com
Identifying the relationships between chromosome structures, nuclear bodies, chromatin
states and gene expression is an overarching goal of nuclear-organization studies …

Heterochromatin drives compartmentalization of inverted and conventional nuclei

M Falk, Y Feodorova, N Naumova, M Imakaev… - Nature, 2019 - nature.com
The nucleus of mammalian cells displays a distinct spatial segregation of active euchromatic
and inactive heterochromatic regions of the genome,. In conventional nuclei, microscopy …

Lamina-associated domains: links with chromosome architecture, heterochromatin, and gene repression

B Van Steensel, AS Belmont - Cell, 2017 - cell.com
In metazoan cell nuclei, hundreds of large chromatin domains are in close contact with the
nuclear lamina. Such lamina-associated domains (LADs) are thought to help organize …

Heterochromatin: guardian of the genome

A Janssen, SU Colmenares… - Annual review of cell and …, 2018 - annualreviews.org
Constitutive heterochromatin is a major component of the eukaryotic nucleus and is
essential for the maintenance of genome stability. Highly concentrated at pericentromeric …

Three-dimensional genome structures of single diploid human cells

L Tan, D ** the spatial organization of the genome
B van Steensel, EEM Furlong - Nature reviews Molecular cell biology, 2019 - nature.com
The spatial organization of the genome into compartments and topologically associated
domains can have an important role in the regulation of gene expression. But could gene …

Single-cell nuclear architecture across cell types in the mouse brain

Y Takei, S Zheng, J Yun, S Shah, N Pierson, J White… - Science, 2021 - science.org
Diverse cell types in tissues have distinct gene expression programs, chromatin states, and
nuclear architectures. To correlate such multimodal information across thousands of single …