Unveiling the crucial role of soil microorganisms in carbon cycling: A review
H Wu, H Cui, C Fu, R Li, F Qi, Z Liu, G Yang… - Science of the Total …, 2024 - Elsevier
Soil microorganisms, by actively participating in the decomposition and transformation of
organic matter through diverse metabolic pathways, play a pivotal role in carbon cycling …
organic matter through diverse metabolic pathways, play a pivotal role in carbon cycling …
Life and death in the soil microbiome: how ecological processes influence biogeochemistry
Soil microorganisms shape global element cycles in life and death. Living soil
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …
iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
The extraordinary diversity of viruses infecting bacteria and archaea is now primarily studied
through metagenomics. While metagenomes enable high-throughput exploration of the viral …
through metagenomics. While metagenomes enable high-throughput exploration of the viral …
Interactions between bacterial and phage communities in natural environments
We commonly acknowledge that bacterial viruses (phages) shape the composition and
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
Background Viruses are a significant player in many biosphere and human ecosystems, but
most signals remain “hidden” in metagenomic/metatranscriptomic sequence datasets due to …
most signals remain “hidden” in metagenomic/metatranscriptomic sequence datasets due to …
DRAM for distilling microbial metabolism to automate the curation of microbiome function
Microbial and viral communities transform the chemistry of Earth's ecosystems, yet the
specific reactions catalyzed by these biological engines are hard to decode due to the …
specific reactions catalyzed by these biological engines are hard to decode due to the …
CheckV assesses the quality and completeness of metagenome-assembled viral genomes
Millions of new viral sequences have been identified from metagenomes, but the quality and
completeness of these sequences vary considerably. Here we present CheckV, an …
completeness of these sequences vary considerably. Here we present CheckV, an …
Soil viral diversity, ecology and climate change
Soil viruses are highly abundant and have important roles in the regulation of host dynamics
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …
Soil microbiomes and climate change
The soil microbiome governs biogeochemical cycling of macronutrients, micronutrients and
other elements vital for the growth of plants and animal life. Understanding and predicting …
other elements vital for the growth of plants and animal life. Understanding and predicting …
[HTML][HTML] Scientists' warning to humanity: microorganisms and climate change
In the Anthropocene, in which we now live, climate change is impacting most life on Earth.
Microorganisms support the existence of all higher trophic life forms. To understand how …
Microorganisms support the existence of all higher trophic life forms. To understand how …