Unlabeled learning algorithms and operations: overview and future trends in defense sector

E e Oliveira, M Rodrigues, JP Pereira… - Artificial Intelligence …, 2024 - Springer
In the defense sector, artificial intelligence (AI) and machine learning (ML) have been used
to analyse and decipher massive volumes of data, namely for target recognition …

Decoding enhancer complexity with machine learning and high-throughput discovery

GD Smith, WH Ching, P Cornejo-Páramo, ES Wong - Genome biology, 2023 - Springer
Enhancers are genomic DNA elements controlling spatiotemporal gene expression. Their
flexible organization and functional redundancies make deciphering their sequence-function …

Dnabert-2: Efficient foundation model and benchmark for multi-species genome

Z Zhou, Y Ji, W Li, P Dutta, R Davuluri, H Liu - arxiv preprint arxiv …, 2023 - arxiv.org
Decoding the linguistic intricacies of the genome is a crucial problem in biology, and pre-
trained foundational models such as DNABERT and Nucleotide Transformer have made …

Enhanced preprocessing approach using ensemble machine learning algorithms for detecting liver disease

AQ Md, S Kulkarni, CJ Joshua, T Vaichole, S Mohan… - Biomedicines, 2023 - mdpi.com
There has been a sharp increase in liver disease globally, and many people are dying
without even knowing that they have it. As a result of its limited symptoms, it is extremely …

Designing antimicrobial peptides using deep learning and molecular dynamic simulations

Q Cao, C Ge, X Wang, PJ Harvey… - Briefings in …, 2023 - academic.oup.com
With the emergence of multidrug-resistant bacteria, antimicrobial peptides (AMPs) offer
promising options for replacing traditional antibiotics to treat bacterial infections, but …

Large language models in bioinformatics: applications and perspectives

J Liu, M Yang, Y Yu, H Xu, K Li, X Zhou - Ar**v, 2024 - pmc.ncbi.nlm.nih.gov
Large language models (LLMs) are a class of artificial intelligence models based on deep
learning, which have great performance in various tasks, especially in natural language …

IChrom-deep: an attention-based deep learning model for identifying chromatin interactions

P Zhang, H Wu - IEEE Journal of Biomedical and Health …, 2023 - ieeexplore.ieee.org
Identification of chromatin interactions is crucial for advancing our knowledge of gene
regulation. However, due to the limitations of high-throughput experimental techniques …

DNAGPT: a generalized pre-trained tool for versatile DNA sequence analysis tasks

D Zhang, W Zhang, Y Zhao, J Zhang, B He… - arxiv preprint arxiv …, 2023 - arxiv.org
Pre-trained large language models demonstrate potential in extracting information from DNA
sequences, yet adapting to a variety of tasks and data modalities remains a challenge. To …

A Representation-Based Query Strategy to Derive Qualitative Features for Improved Churn Prediction

S De, P Prabu - IEEE Access, 2023 - ieeexplore.ieee.org
The effectiveness of any Machine Learning process depends on the accuracy of annotated
data that is used to train a learner. However, manual annotation is expensive. Hence …

CRCNet: Global-local context and multi-modality cross attention for polyp segmentation

J Zhu, M Ge, Z Chang, W Dong - Biomedical Signal Processing and Control, 2023 - Elsevier
Accurate polyp segmentation is important for the diagnosis and treatment of colon cancer. In
recent years, efforts have been made to improve the encoder-decoder framework by using …