Genomics-assisted breeding in the CGIAR research program on roots, tubers and bananas (RTB)

M Friedmann, A Asfaw, NL Anglin, LA Becerra… - Agriculture, 2018 - mdpi.com
Breeding in the CGIAR Research Program on Roots, Tubers and Bananas (RTB) targets
highly diverse biotic and abiotic constraints, whilst meeting complex end-user quality …

Three New Genome Assemblies Support a Rapid Radiation in Musa acuminata (Wild Banana)

M Rouard, G Droc, G Martin, J Sardos… - Genome biology and …, 2018 - academic.oup.com
Edible bananas result from interspecific hybridization between Musa acuminata and Musa
balbisiana, as well as among subspecies in M. acuminata. Four particular M. acuminata …

MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genoty** data

M Ruas, V Guignon, G Sempere, J Sardos, Y Hueber… - Database, 2017 - academic.oup.com
Unraveling the genetic diversity held in genebanks on a large scale is underway, due to
advances in Next-generation sequence (NGS) based technologies that produce high …

Two large reciprocal translocations characterized in the disease resistance-rich burmannica genetic group of Musa acuminata

M Dupouy, FC Baurens, P Derouault… - Annals of …, 2019 - academic.oup.com
Abstract Background and Aims Banana cultivars are derived from hybridizations involving
Musa acuminata subspecies. The latter diverged following geographical isolation in distinct …

Gigwa v2—Extended and improved genotype investigator

G Sempéré, A Pétel, M Rouard, J Frouin… - …, 2019 - academic.oup.com
Background The study of genetic variations is the basis of many research domains in
biology. From genome structure to population dynamics, many applications involve the use …

Genome assemblies and comparison of two Neotropical spiral gingers: Costus pulverulentus and C. lasius

J Harenčár, OM Vargas, M Escalona… - Journal of …, 2023 - academic.oup.com
The spiral gingers (Costus L.) are a pantropical genus of herbaceous perennial monocots;
the Neotropical clade of Costus radiated rapidly in the past few million years into over 60 …

[HTML][HTML] Association map** between candidate gene SNP and production and oil quality traits in interspecific oil palm hybrids

M Astorkia, M Hernandez, S Bocs… - Plants, 2019 - mdpi.com
Oil palm production is gaining importance in Central and South America. However, the main
species Elaeis guineensis (Eg) is suffering severely from bud rod disease, restricting the …

[PDF][PDF] Rice Galaxy: an open resource for plant science

V Juanillas, A Dereeper, N Beaume, G Droc… - …, 2019 - academic.oup.com
Background Rice molecular genetics, breeding, genetic diversity, and allied research (such
as rice-pathogen interaction) have adopted sequencing technologies and high-density …

metaXplor: an interactive viral and microbial metagenomic data manager

G Sempéré, A Pétel, M Abbé, P Lefeuvre… - …, 2021 - academic.oup.com
Background Efficiently managing large, heterogeneous data in a structured yet flexible way
is a challenge to research laboratories working with genomic data. Specifically regarding …

KaruBioNet: a network and discussion group for a better collaboration and structuring of bioinformatics in Guadeloupe (French West Indies)

D Couvin, A Dereeper, DF Meyer, C Noroy… - Bioinformatics …, 2022 - academic.oup.com
Sequencing and other biological data are now more frequently available and at a lower
price. Mutual tools and strategies are needed to analyze the huge amount of heterogeneous …