The life and times of a tRNA

EM Phizicky, AK Hopper - Rna, 2023 - rnajournal.cshlp.org
The study of eukaryotic tRNA processing has given rise to an explosion of new information
and insights in the last several years. We now have unprecedented knowledge of each step …

Modifications and functional genomics of human transfer RNA

T Pan - Cell research, 2018 - nature.com
Transfer RNA (tRNA) is present at tens of millions of transcripts in a human cell and is the
most abundant RNA in moles among all cellular RNAs. tRNA is also the most extensively …

Gene expression regulation mediated through reversible m6A RNA methylation

Y Fu, D Dominissini, G Rechavi, C He - Nature Reviews Genetics, 2014 - nature.com
Cellular RNAs carry diverse chemical modifications that used to be regarded as static and
having minor roles in'fine-tuning'structural and functional properties of RNAs. In this Review …

[HTML][HTML] ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility

G Zheng, JA Dahl, Y Niu, P Fedorcsak, CM Huang… - Molecular cell, 2013 - cell.com
Summary N 6-methyladenosine (m 6 A) is the most prevalent internal modification of
messenger RNA (mRNA) in higher eukaryotes. Here we report ALKBH5 as another …

Naturally occurring modified ribonucleosides

PJ McCown, A Ruszkowska, CN Kunkler… - Wiley …, 2020 - Wiley Online Library
The chemical identity of RNA molecules beyond the four standard ribonucleosides has
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …

2-Oxoglutarate-dependent oxygenases

MS Islam, TM Leissing, R Chowdhury… - Annual review of …, 2018 - annualreviews.org
2-Oxoglutarate (2OG)-dependent oxygenases (2OGXs) catalyze a remarkably diverse range
of oxidative reactions. In animals, these comprise hydroxylations and N-demethylations …

N6-Methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO

G Jia, YE Fu, XU Zhao, Q Dai, G Zheng, Y Yang… - Nature chemical …, 2011 - nature.com
We report here that fat mass and obesity-associated protein (FTO) has efficient oxidative
demethylation activity targeting the abundant N 6-methyladenosine (m6A) residues in RNA …

New frontiers in translational control of the cancer genome

ML Truitt, D Ruggero - Nature Reviews Cancer, 2016 - nature.com
The past several years have seen dramatic leaps in our understanding of how gene
expression is rewired at the translation level during tumorigenesis to support the …

[HTML][HTML] The AlkB family of Fe (II)/α-ketoglutarate-dependent dioxygenases: repairing nucleic acid alkylation damage and beyond

BI Fedeles, V Singh, JC Delaney, D Li… - Journal of Biological …, 2015 - Elsevier
The AlkB family of Fe (II)-and α-ketoglutarate-dependent dioxygenases is a class of
ubiquitous direct reversal DNA repair enzymes that remove alkyl adducts from nucleobases …

Biosynthesis and function of posttranscriptional modifications of transfer RNAs

B El Yacoubi, M Bailly… - Annual review of …, 2012 - annualreviews.org
Posttranscriptional modifications of transfer RNAs (tRNAs) are critical for all core aspects of
tRNA function, such as folding, stability, and decoding. Most tRNA modifications were …