Synthetic biological approaches for Optogenetics and tools for transcriptional Light‐control in bacteria

A Baumschlager, M Khammash - Advanced biology, 2021 - Wiley Online Library
Light has become established as a tool not only to visualize and investigate but also to steer
biological systems. This review starts by discussing the unique features that make light such …

Bacterial two-component systems as sensors for synthetic biology applications

JT Lazar, JJ Tabor - Current Opinion in Systems Biology, 2021 - Elsevier
Two-component systems (TCSs) are a ubiquitous family of signal transduction pathways that
enable bacteria to sense and respond to physical, chemical, and biological stimuli outside …

Engineering AraC to make it responsive to light instead of arabinose

E Romano, A Baumschlager, EB Akmeric… - Nature chemical …, 2021 - nature.com
The l-arabinose-responsive AraC and its cognate PBAD promoter underlie one of the most
often used chemically inducible prokaryotic gene expression systems in microbiology and …

The red edge: bilin-binding photoreceptors as optogenetic tools and fluorescence reporters

K Tang, HM Beyer, MD Zurbriggen… - Chemical …, 2021 - ACS Publications
This review adds the bilin-binding phytochromes to the Chemical Reviews thematic issue
“Optogenetics and Photopharmacology”. The work is structured into two parts. We first …

Engineering of bidirectional, cyanobacteriochrome-based light-inducible dimers (BICYCL) s

J Jang, K Tang, J Youn, S McDonald, HM Beyer… - Nature …, 2023 - nature.com
Optogenetic tools for controlling protein–protein interactions (PPIs) have been developed
from a small number of photosensory modules that respond to a limited selection of …

Programming bacteria with light—sensors and applications in synthetic biology

Z Liu, J Zhang, J **, Z Geng, Q Qi, Q Liang - Frontiers in microbiology, 2018 - frontiersin.org
Photo-receptors are widely present in both prokaryotic and eukaryotic cells, which serves as
the foundation of tuning cell behaviors with light. While practices in eukaryotic cells have …

Rewiring bacterial two-component systems by modular DNA-binding domain swap**

SR Schmidl, F Ekness, K Sofjan, KNM Daeffler… - Nature Chemical …, 2019 - nature.com
Two-component systems (TCSs) are the largest family of multi-step signal transduction
pathways and valuable sensors for synthetic biology. However, most TCSs remain …

Optogenetics and biosensors set the stage for metabolic cybergenetics

C Carrasco-López, SA García-Echauri, T Kichuk… - Current opinion in …, 2020 - Elsevier
Highlights•Metabolic cybergenetics promises unprecedented real-time control of
fermentations.•Optogenetic regulators make ideal actuators for metabolic cybergenetics.• …

Light-regulated gene expression in Bacteria: Fundamentals, advances, and perspectives

R Ohlendorf, A Möglich - Frontiers in Bioengineering and …, 2022 - frontiersin.org
Numerous photoreceptors and genetic circuits emerged over the past two decades and now
enable the light-dependent ie, optogenetic, regulation of gene expression in bacteria …

Optogenetics in bacteria–applications and opportunities

F Lindner, A Diepold - FEMS Microbiology Reviews, 2022 - academic.oup.com
Optogenetics holds the promise of controlling biological processes with superb temporal
and spatial resolution at minimal perturbation. Although many of the light-reactive proteins …