Applications of biological pores in nanomedicine, sensing, and nanoelectronics

S Majd, EC Yusko, YN Billeh, MX Macrae… - Current opinion in …, 2010 - Elsevier
Biological protein pores and pore-forming peptides can generate a pathway for the flux of
ions and other charged or polar molecules across cellular membranes. In nature, these …

Black lipid membranes

M Winterhalter - Current Opinion in Colloid & Interface Science, 2000 - Elsevier
New techniques have been introduced or pushed forward to render this model system more
powerful. Dynamical light scattering allows us to quantify, in non-pertubative way …

Three-dimensional Poisson-Nernst-Planck theory studies: Influence of membrane electrostatics on gramicidin A channel conductance

AE Cardenas, RD Coalson, MG Kurnikova - Biophysical Journal, 2000 - cell.com
A recently introduced real-space lattice methodology for solving the three-dimensional
Poisson-Nernst-Planck equations is used to compute current-voltage relations for ion …

Tests of continuum theories as models of ion channels. I. Poisson− Boltzmann theory versus Brownian dynamics

G Moy, B Corry, S Kuyucak, SH Chung - Biophysical Journal, 2000 - cell.com
Continuum theories of electrolytes are widely used to describe physical processes in various
biological systems. Although these are well-established theories in macroscopic situations, it …

Salting out the ionic selectivity of a wide channel: the asymmetry of OmpF

A Alcaraz, EM Nestorovich, M Aguilella-Arzo… - Biophysical journal, 2004 - cell.com
Although the crystallographic structure of the bacterial porin OmpF has been known for a
decade, the physical mechanisms of its ionic selectivity are still under investigation. We …

The electrostatics of lipid surfaces

M Langner, K Kubica - Chemistry and Physics of Lipids, 1999 - Elsevier
Charged lipids constitute a substantial fraction of all membrane lipids. Their charges vary in
quantity and distribution within their headgroup regions. In long range interactions, their …

Models of permeation in ion channels

S Kuyucak, OS Andersen… - Reports on Progress in …, 2001 - iopscience.iop.org
Ion channels are formed by specific proteins embedded in the cell membrane and provide
pathways for fast and controlled flow of selected ions down their electrochemical gradient …

Poisson-Nernst-Planck theory approach to the calculation of current through biological ion channels

RD Coalson, MG Kurnikova - IEEE transactions on …, 2005 - ieeexplore.ieee.org
The Poisson-Nernst-Planck (PNP) theory of electro-diffusion is reviewed. Techniques for
numerical solution of the three-dimensional PNP equations are summarized, and several …

[HTML][HTML] Analysis of SARS-CoV E protein ion channel activity by tuning the protein and lipid charge

C Verdiá-Báguena, JL Nieto-Torres, A Alcaraz… - … et Biophysica Acta (BBA …, 2013 - Elsevier
A partial characterization of the ion channels formed by the SARS coronavirus (CoV)
envelope (E) protein was previously reported (C. Verdiá-Báguena et al., 2012 [12]). Here …

[HTML][HTML] Changes in phosphatidylcholine headgroup tilt and water order induced by monovalent salts: molecular dynamics simulations

JN Sachs, H Nanda, HI Petrache, TB Woolf - Biophysical journal, 2004 - cell.com
The association between monovalent salts and neutral lipid bilayers is known to influence
global bilayer structural properties such as headgroup conformational fluctuations and the …